RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 HIST1H2AGP0C0S8 130 aaPredicted RBP3.63□□□□□ -1.83
LMNB1-205ENST00000472034 RD3LP0DJH9 198 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 MPC1LP0DKB6 136 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 PSG1P11464 419 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 COX7A2P14406 83 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 HIST1H2ADP20671 130 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 RPS3P23396 243 aaKnown RBP eCLIP3.63□□□□□ -1.838e-7■■■□□ 17.9
LMNB1-205ENST00000472034 IMPA1P29218 277 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 EPHA2P29317 976 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 CFHR2P36980 270 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 MDH2P40926 338 aaKnown RBP3.63□□□□□ -1.83
LMNB1-205ENST00000472034 RBM34P42696 430 aaKnown RBP3.63□□□□□ -1.83
LMNB1-205ENST00000472034 GLP1RP43220 463 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 RFX2P48378 723 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 CAV2P51636 162 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 UCP3P55916 312 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 TCTAP57738 103 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 SNRPD2P62316 118 aaKnown RBP3.63□□□□□ -1.83
LMNB1-205ENST00000472034 DYNLT1P63172 113 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 LCN2P80188 198 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 PAX2Q02962 417 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 FOXI1Q12951 378 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 GAGE5Q13069 117 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 GAGE6Q13070 117 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 SKP2Q13309 424 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 EBPQ15125 230 aaKnown RBP3.63□□□□□ -1.83
LMNB1-205ENST00000472034 RBMS2Q15434 407 aaKnown RBP3.63□□□□□ -1.83
LMNB1-205ENST00000472034 NNATQ16517 81 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 ALG10BQ5I7T1 473 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 C1orf194Q5T5A4 169 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 DCAF12L2Q5VW00 463 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 HIST2H2AA3Q6FI13 130 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 FAM71F2Q6NXP2 309 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 NIPAL3Q6P499 406 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 FRRS1Q6ZNA5 592 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 TMPPEQ6ZT21 453 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 C5orf24Q7Z6I8 188 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 S100A7AQ86SG5 101 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 TMEM217Q8N7C4 229 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 C11orf44Q8N8P7 122 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 LRRC75AQ8NAA5 344 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 ZSCAN4Q8NAM6 433 aaPredicted RBP3.63□□□□□ -1.83
LMNB1-205ENST00000472034 LFNGQ8NES3 379 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 OR9I1Q8NGQ6 314 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 OR1J2Q8NGS2 313 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 OR6N2Q8NGY6 317 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 OR5B3Q8NH48 314 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 OR52N5Q8NH56 324 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 OR5W2Q8NH69 310 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 THAP6Q8TBB0 222 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 TFB1MQ8WVM0 346 aaKnown RBP3.63□□□□□ -1.83
LMNB1-205ENST00000472034 PIGCQ92535 297 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 GGHQ92820 318 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 TOMM40LQ969M1 308 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 PINX1Q96BK5 328 aaKnown RBP3.63□□□□□ -1.83
LMNB1-205ENST00000472034 ZG16BQ96DA0 208 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 YIPF6Q96EC8 236 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 CPNE2Q96FN4 548 aaPredicted RBP3.63□□□□□ -1.83
LMNB1-205ENST00000472034 GMPPAQ96IJ6 420 aaPredicted RBP3.63□□□□□ -1.83
LMNB1-205ENST00000472034 PAFAH2Q99487 392 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 LMF2Q9BU23 707 aaKnown RBP3.63□□□□□ -1.83
LMNB1-205ENST00000472034 C20orf85Q9H1P6 137 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 TUBB1Q9H4B7 451 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 EXOSC4Q9NPD3 245 aaKnown RBP3.63□□□□□ -1.83
LMNB1-205ENST00000472034 SLC52A3Q9NQ40 469 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 PIPOXQ9P0Z9 390 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 CLN8Q9UBY8 286 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 SLC2A6Q9UGQ3 507 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 SIGLEC9Q9Y336 463 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 LRP12Q9Y561 859 aa3.63□□□□□ -1.83
LMNB1-205ENST00000472034 SPIN1Q9Y657 262 aaPredicted RBP3.63□□□□□ -1.83
LMNB1-205ENST00000472034 IGHV2OR16-5A0A0B4J2B6 119 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 C1orf226A1L170 272 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 FAM90A18PA6NE21 464 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 FAM90A16PA6NEW6 464 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 FAM90A9PA6NNJ1 464 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 ZAR1LA6NP61 321 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 ZNF724A8MTY0 619 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 FAM90A5PA8MXJ8 464 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 G3V3Q6 166 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 PPP1R2P9O14990 202 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 ST8SIA3O43173 380 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 RBFOX2O43251 390 aaKnown RBP eCLIP3.62□□□□□ -1.836e-10■■■■□ 19.3
LMNB1-205ENST00000472034 RAD51CO43502 376 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 DNPH1O43598 174 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 SSNA1O43805 119 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 TIMM8AO60220 97 aaPredicted RBP3.62□□□□□ -1.83
LMNB1-205ENST00000472034 PAGE4O60829 102 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 EEDO75530 441 aaKnown RBP3.62□□□□□ -1.83
LMNB1-205ENST00000472034 FOXH1O75593 365 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 UTS2O95399 124 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 NUDT3O95989 172 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 HBZP02008 142 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 ARG1P05089 322 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 FAM90A15PP0C7V4 464 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 FAM90A14PP0C7W9 464 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 GKN3PP0CG01 181 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 HIST1H1EP10412 219 aaKnown RBP3.62□□□□□ -1.83
LMNB1-205ENST00000472034 PSG2P11465 335 aa3.62□□□□□ -1.83
LMNB1-205ENST00000472034 IGLL1P15814 213 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms