RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 ELMOD2Q8IZ81 293 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 C17orf78Q8N4C9 275 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 CD177Q8N6Q3 437 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 OR5D18Q8NGL1 313 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 ZNF420Q8TAQ5 688 aaPredicted RBP3.02□□□□□ -1.93
COL9A1-206ENST00000470652 NDNFQ8TB73 568 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 TRMT10AQ8TBZ6 339 aaKnown RBP3.02□□□□□ -1.93
COL9A1-206ENST00000470652 RPS4Y2Q8TD47 263 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 KLF14Q8TD94 323 aaPredicted RBP3.02□□□□□ -1.93
COL9A1-206ENST00000470652 GPR148Q8TDV2 347 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 GHSRQ92847 366 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 MYDGFQ969H8 173 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 FGGYQ96C11 551 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 MUCL1Q96DR8 90 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 YIPF6Q96EC8 236 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 MGLLQ99685 303 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 CDCA4Q9BXL8 241 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 MROQ9BYG7 248 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 HDHD2Q9H0R4 259 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 Q9H521 79 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 ZNF665Q9H7R5 613 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 CA10Q9NS85 328 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 SCN3BQ9NY72 215 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 CNOT2Q9NZN8 540 aaKnown RBP3.02□□□□□ -1.93
COL9A1-206ENST00000470652 TAAR3PQ9P1P4 343 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 DUX4Q9UBX2 424 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 PLEKHA6Q9Y2H5 1048 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 FBXO7Q9Y3I1 522 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 RNF115Q9Y4L5 304 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 PRRC2AP48634 2157 aaKnown RBP3.02□□□□□ -1.93
COL9A1-206ENST00000470652 ZANQ9Y493 2812 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 YLPM1P49750 1951 aaKnown RBP3.01□□□□□ -1.93
COL9A1-206ENST00000470652 SETXQ7Z333 2677 aaKnown RBP3.01□□□□□ -1.93
COL9A1-206ENST00000470652 IGHV3OR15-7A0A075B7D8 119 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 GGT3PA6NGU5 568 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 SRRM4A7MD48 611 aaKnown RBP3.01□□□□□ -1.93
COL9A1-206ENST00000470652 CD300LBA8K4G0 201 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 FOXI3A8MTJ6 420 aaPredicted RBP3.01□□□□□ -1.93
COL9A1-206ENST00000470652 GABRPO00591 440 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 SYT7O43581 403 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 SYNGR1O43759 233 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 ANGPTL7O43827 346 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 RHBDL1O75783 438 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 SULT1C4O75897 302 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 TNFAIP8O95379 198 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 IGHV1-46P01743 117 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 NR2C1P13056 603 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 COX6B1P14854 86 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 CD36P16671 472 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 GUCA1AP43080 201 aaPredicted RBP3.01□□□□□ -1.93
COL9A1-206ENST00000470652 CRYBB2P43320 205 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 CEBPDP49716 269 aaPredicted RBP3.01□□□□□ -1.93
COL9A1-206ENST00000470652 GBX2P52951 348 aaPredicted RBP3.01□□□□□ -1.93
COL9A1-206ENST00000470652 SNU13P55769 128 aaKnown RBP3.01□□□□□ -1.93
COL9A1-206ENST00000470652 PCBD1P61457 104 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 VBP1P61758 197 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 GRB2P62993 217 aaKnown RBP3.01□□□□□ -1.93
COL9A1-206ENST00000470652 MXD1Q05195 221 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 TMED1Q13445 227 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 SPCS2Q15005 226 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 MPPED2Q15777 294 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 UBE2V2Q15819 145 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 BEX5Q5H9J7 111 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 C22orf42Q6IC83 251 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 OR10K2Q6IF99 312 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 MRPL21Q7Z2W9 205 aaKnown RBP3.01□□□□□ -1.93
COL9A1-206ENST00000470652 FAM220AQ7Z4H9 259 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 BIVMQ86UB2 503 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 ANGPTL5Q86XS5 388 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 CALHM1Q8IU99 346 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.01□□□□□ -1.93
COL9A1-206ENST00000470652 SYS1Q8N2H4 156 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 ZNF676Q8N7Q3 588 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 SAMD12Q8N8I0 201 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 ZNRF1Q8ND25 227 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 OR13C9Q8NGT0 318 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 OR10K1Q8NGX5 313 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 OR52N1Q8NH53 320 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 FNDC8Q8TC99 324 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 MRAPQ8TCY5 172 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 TSEN15Q8WW01 171 aaKnown RBP3.01□□□□□ -1.93
COL9A1-206ENST00000470652 ASB17Q8WXJ9 295 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 PIGCQ92535 297 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 YIPF5Q969M3 257 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 SPTSSAQ969W0 71 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 SMIM19Q96E16 107 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 DERL3Q96Q80 235 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 GAL3ST1Q99999 423 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 FUNDC2Q9BWH2 189 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 MND1Q9BWT6 205 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 SLITRK2Q9H156 845 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 NARFLQ9H6Q4 476 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 SRD5A3Q9H8P0 318 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 PLEKHF2Q9H8W4 249 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 EXOSC4Q9NPD3 245 aaKnown RBP3.01□□□□□ -1.93
COL9A1-206ENST00000470652 UFSP2Q9NUQ7 469 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 BABAM2Q9NXR7 383 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 NUFIP1Q9UHK0 495 aaKnown RBP3.01□□□□□ -1.93
COL9A1-206ENST00000470652 PURGQ9UJV8 347 aaKnown RBP3.01□□□□□ -1.93
COL9A1-206ENST00000470652 ERGIC3Q9Y282 383 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms