RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 ZNF48Q96MX3 618 aaPredicted RBP12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 ELF5Q9UKW6 265 aaPredicted RBP12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 MINOS1-NBL1R4GNA1 71 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 TRDCB7Z8K6 153 aa12.12□□□□□ -0.47
CDC42SE1-203ENST00000470278 SSX5O60225 188 aa12.12□□□□□ -0.47
CDC42SE1-203ENST00000470278 HILS1P60008 231 aa12.12□□□□□ -0.47
CDC42SE1-203ENST00000470278 DEFB112Q30KQ8 113 aa12.12□□□□□ -0.47
CDC42SE1-203ENST00000470278 UTF1Q5T230 341 aa12.12□□□□□ -0.47
CDC42SE1-203ENST00000470278 PRR18Q8N4B5 295 aa12.12□□□□□ -0.47
CDC42SE1-203ENST00000470278 LINC00311Q8N616 119 aa12.12□□□□□ -0.47
CDC42SE1-203ENST00000470278 OR4A4PQ8NGN8 299 aa12.12□□□□□ -0.47
CDC42SE1-203ENST00000470278 UBALD1Q8TB05 177 aa12.12□□□□□ -0.47
CDC42SE1-203ENST00000470278 ZNF418Q8TF45 676 aaPredicted RBP12.12□□□□□ -0.47
CDC42SE1-203ENST00000470278 NUDCD2Q8WVJ2 157 aa12.12□□□□□ -0.47
CDC42SE1-203ENST00000470278 CABLES2Q9BTV7 478 aa12.12□□□□□ -0.47
CDC42SE1-203ENST00000470278 MMP28Q9H239 520 aa12.12□□□□□ -0.47
CDC42SE1-203ENST00000470278 ADAM30Q9UKF2 790 aa12.12□□□□□ -0.47
CDC42SE1-203ENST00000470278 PSG11Q9UQ72 335 aa12.12□□□□□ -0.47
CDC42SE1-203ENST00000470278 A3GALT2U3KPV4 340 aa12.12□□□□□ -0.47
CDC42SE1-203ENST00000470278 A0A1W2PRD5 423 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 A0A1W2PRF3 423 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 A0A1W2PRM7 423 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 FAM172BPA6NC97 362 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 J3QR06 171 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 TOR1AO14656 332 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 YPEL1O60688 119 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 PRRX1P54821 245 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 LGALS4P56470 323 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 LTC4SQ16873 150 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 FOXB2Q5VYV0 432 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 LAX1Q8IWV1 398 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 ZNF439Q8NDP4 499 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 MALSU1Q96EH3 234 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 YPEL2Q96QA6 119 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 MIXL1Q9H2W2 232 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 OCEL1Q9H607 264 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 OR2S2Q9NQN1 319 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 ZNRD1Q9P1U0 126 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 GNG12Q9UBI6 72 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 FAM96BQ9Y3D0 163 aa12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 AMMECR1Q9Y4X0 333 aaPredicted RBP12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 SOX21Q9Y651 276 aaPredicted RBP12.11□□□□□ -0.47
CDC42SE1-203ENST00000470278 RGS5O15539 181 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 FABP7O15540 132 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 TCF21O43680 179 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 RGS11O94810 467 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 HLA-DQB1P01920 261 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 SCTP09683 121 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 HTR1DP28221 377 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 CBX5P45973 191 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 HERPUD1Q15011 391 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 AANATQ16613 207 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 LDLRAD2Q5SZI1 272 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 RBMS3Q6XE24 437 aaKnown RBP12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 Q6YL49 198 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 SLC25A48Q6ZT89 311 aaKnown RBP12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 IZUMO1Q8IYV9 350 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 SIGLECL1Q8N7X8 197 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 MCFD2Q8NI22 146 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 C15orf40Q8WUR7 153 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 IL1F10Q8WWZ1 152 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 LEAP2Q969E1 77 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 JMJD8Q96S16 334 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 OCSTAMPQ9BR26 566 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 DCUN1D5Q9BTE7 237 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 C6orf62Q9GZU0 229 aaPredicted RBP12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 MEGF9Q9H1U4 602 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 EXTL2Q9UBQ6 330 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 ZNF230Q9UIE0 474 aaPredicted RBP12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 ANAPC10Q9UM13 185 aa12.1□□□□□ -0.47
CDC42SE1-203ENST00000470278 IGHV3-43A0A0B4J1X8 118 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 IGKV1-6A0A0C4DH72 117 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 MDFIC2A0A1B0GVS7 189 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 LEUTXA8MZ59 168 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 FAM25AB3EWG3 89 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 FAM25CB3EWG5 89 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 FAM25GB3EWG6 89 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 LY6LH3BQJ8 138 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 BUB1B-PAK6H3BSN5 160 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 CLDN34H7C241 214 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 CTDSP2O14595 271 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 ITGB1BP1O14713 200 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 IGHV3-43DP0DP04 118 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 ZBTB25P24278 435 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 CEACAM3P40198 252 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 ZNF137PP52743 207 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 GNMTQ14749 295 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 MORN2Q502X0 79 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 LHFPL4Q7Z7J7 247 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 TMEM86BQ8N661 226 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 C17orf50Q8WW18 174 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 TOLLIPQ9H0E2 274 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 MMP27Q9H306 513 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 SCPEP1Q9HB40 452 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 DPM3Q9P2X0 92 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 RABL2AQ9UBK7 228 aaPredicted RBP12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 RABL2BQ9UNT1 228 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 POMT1Q9Y6A1 747 aa12.09□□□□□ -0.47
CDC42SE1-203ENST00000470278 TRBV6-7A0A0A0MS04 114 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 A6NHS1 94 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms