RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 LOC105371242A0A075B767 164 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 A0A0A6YYH2 397 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 A6NJ64 397 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 CD33P20138 364 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 GLRA1P23415 457 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 COL10A1Q03692 680 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 TRIP6Q15654 476 aaKnown RBP10.66□□□□□ -0.7
USP11-206ENST00000469080 DEFB109BQ30KR1 87 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 PIGYQ3MUY2 71 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 CST9LP1Q5W188 147 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 OR51F2Q8NH61 342 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 RDH5Q92781 318 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 MIEN1Q9BRT3 115 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 HIPK2Q9H2X6 1198 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 ZNF552Q9H707 407 aaPredicted RBP10.66□□□□□ -0.7
USP11-206ENST00000469080 PLSCR2Q9NRY7 297 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 FAM206AQ9NX38 181 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 LSM5Q9Y4Y9 91 aaKnown RBP10.66□□□□□ -0.7
USP11-206ENST00000469080 AKAP13Q12802 2813 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 RAB27BO00194 218 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 LYZL6O75951 148 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 TDGF1P13385 188 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 NTF4P34130 210 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 HIKESHIQ53FT3 197 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 ZNF429Q86V71 674 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 SULF2Q8IWU5 870 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 OR4X1Q8NH49 305 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 LIPHQ8WWY8 451 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 BCL2L2Q92843 193 aaPredicted RBP10.66□□□□□ -0.7
USP11-206ENST00000469080 SLC17A5Q9NRA2 495 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 SLC7A10Q9NS82 523 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 OR10J1P30954 320 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 MMP16P51512 607 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 UNC119Q13432 240 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 MRPL21Q7Z2W9 205 aaKnown RBP10.66□□□□□ -0.7
USP11-206ENST00000469080 OR2V1Q8NHB1 315 aa10.66□□□□□ -0.7
USP11-206ENST00000469080 FUT3P21217 361 aa10.65□□□□□ -0.7
USP11-206ENST00000469080 FPR2P25090 351 aa10.65□□□□□ -0.7
USP11-206ENST00000469080 ASCL1P50553 236 aa10.65□□□□□ -0.7
USP11-206ENST00000469080 P2RY6Q15077 328 aa10.65□□□□□ -0.7
USP11-206ENST00000469080 ABCA11PQ4W5N1 156 aa10.65□□□□□ -0.7
USP11-206ENST00000469080 SELENOHQ8IZQ5 122 aaKnown RBP10.65□□□□□ -0.7
USP11-206ENST00000469080 FBXL14Q8N1E6 418 aa10.65□□□□□ -0.7
USP11-206ENST00000469080 FAM213BQ8TBF2 198 aa10.65□□□□□ -0.7
USP11-206ENST00000469080 CABLES2Q9BTV7 478 aa10.65□□□□□ -0.7
USP11-206ENST00000469080 PLA2G2EQ9NZK7 142 aa10.65□□□□□ -0.7
USP11-206ENST00000469080 PTPRQQ9UMZ3 2332 aa10.65□□□□□ -0.7
USP11-206ENST00000469080 TRBV5-7A0A0A0MS05 114 aa10.65□□□□□ -0.7
USP11-206ENST00000469080 SUMO3P55854 103 aaPredicted RBP10.65□□□□□ -0.7
USP11-206ENST00000469080 HOXA4Q00056 320 aaPredicted RBP10.65□□□□□ -0.7
USP11-206ENST00000469080 UNQ5815/PRO19632Q6UWF5 114 aa10.65□□□□□ -0.7
USP11-206ENST00000469080 STPG4Q8N801 248 aa10.65□□□□□ -0.7
USP11-206ENST00000469080 NIPSNAP3BQ9BS92 247 aa10.65□□□□□ -0.7
USP11-206ENST00000469080 MCTS1Q9ULC4 181 aaKnown RBP10.65□□□□□ -0.7
USP11-206ENST00000469080 C14orf166Q9Y224 244 aaKnown RBP10.65□□□□□ -0.7
USP11-206ENST00000469080 GPM6AP51674 278 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 MYPOPQ86VE0 399 aaPredicted RBP10.64□□□□□ -0.71
USP11-206ENST00000469080 ZNF700Q9H0M5 742 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 KIR2DL5BA0A0G2JN68 375 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 KIR2DL5BA0A0G2JPC4 375 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 MEOX1P50221 254 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 UBE2G2P60604 165 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 PLP2Q04941 152 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 OCIAD2Q56VL3 154 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 KIR2DL5AQ8N109 375 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 KCNG3Q8TAE7 436 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 ZNF596Q8TC21 504 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 MS4A10Q96PG2 267 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 ZZEF1O43149 2961 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 GJE1A6NN92 205 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 NGFP01138 241 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 IGHV3-13P01766 116 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 IGHV3-7P01780 117 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 GRPP07492 148 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 PPP1CCP36873 323 aaKnown RBP10.64□□□□□ -0.71
USP11-206ENST00000469080 CYCSP99999 105 aaKnown RBP10.64□□□□□ -0.71
USP11-206ENST00000469080 ROM1Q03395 351 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 FBLN7Q53RD9 439 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 NECAP1Q8NC96 275 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 ZNF738Q8NE65 137 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 CHRNA10Q9GZZ6 450 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 VSIG4Q9Y279 399 aa10.64□□□□□ -0.71
USP11-206ENST00000469080 AHRRA9YTQ3 701 aa10.63□□□□□ -0.71
USP11-206ENST00000469080 DOK3Q7L591 496 aa10.63□□□□□ -0.71
USP11-206ENST00000469080 DTX1Q86Y01 620 aa10.63□□□□□ -0.71
USP11-206ENST00000469080 FOXD3Q9UJU5 478 aaPredicted RBP10.63□□□□□ -0.71
USP11-206ENST00000469080 PIEZO1Q92508 2521 aa10.63□□□□□ -0.71
USP11-206ENST00000469080 WISP2O76076 250 aa10.63□□□□□ -0.71
USP11-206ENST00000469080 NRASP01111 189 aa10.63□□□□□ -0.71
USP11-206ENST00000469080 SERPINA7P05543 415 aa10.63□□□□□ -0.71
USP11-206ENST00000469080 MMP9P14780 707 aa10.63□□□□□ -0.71
USP11-206ENST00000469080 COMPP49747 757 aaPredicted RBP10.63□□□□□ -0.71
USP11-206ENST00000469080 ZFP36L1Q07352 338 aaKnown RBP10.63□□□□□ -0.71
USP11-206ENST00000469080 RAB32Q13637 225 aa10.63□□□□□ -0.71
USP11-206ENST00000469080 ENDOGQ14249 297 aaKnown RBP10.63□□□□□ -0.71
USP11-206ENST00000469080 TDRG1Q3Y452 100 aa10.63□□□□□ -0.71
USP11-206ENST00000469080 TVP23CQ96ET8 276 aa10.63□□□□□ -0.71
USP11-206ENST00000469080 TXN2Q99757 166 aa10.63□□□□□ -0.71
USP11-206ENST00000469080 VAX2Q9UIW0 290 aa10.63□□□□□ -0.71
USP11-206ENST00000469080 CST4P01036 141 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms