RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 CDK2P24941 298 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 S100A11P31949 105 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 TNFSF8P32971 234 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 PITPNBP48739 271 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 CDC34P49427 236 aaPredicted RBP5.73□□□□□ -1.49
SCAF4-204ENST00000467731 BTG1P62324 171 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 VAMP2P63027 116 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 ODF1Q14990 250 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 CNIH2Q6PI25 160 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 FAM185AQ8N0U4 392 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 FAM89BQ8N5H3 189 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 S100A16Q96FQ6 103 aaKnown RBP5.73□□□□□ -1.49
SCAF4-204ENST00000467731 CXorf58Q96LI9 332 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 WDFY2Q96P53 400 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 C11orf54Q9H0W9 315 aaPredicted RBP5.73□□□□□ -1.49
SCAF4-204ENST00000467731 PRDM13Q9H4Q3 707 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 ZMAT3Q9HA38 289 aaKnown RBP5.73□□□□□ -1.49
SCAF4-204ENST00000467731 WIPI2Q9Y4P8 454 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 PUS1Q9Y606 427 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCAF4-204ENST00000467731 WNK2Q9Y3S1 2297 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 ARHGAP32A7KAX9 2087 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 TRAV38-1A0A0B4J264 116 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 SERTM2A0A1B0GWG4 89 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 CXorf65A6NEN9 183 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 HSPB6O14558 160 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 OR2H2O95918 312 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 HAND1O96004 215 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 GYPAP02724 150 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 ZNF44P15621 663 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 DNASE1P24855 282 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 BLVRBP30043 206 aaPredicted RBP5.73□□□□□ -1.49
SCAF4-204ENST00000467731 GABRA2P47869 451 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 TMEM50BP56557 158 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 IL13RA2Q14627 380 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 STUMQ69YW2 141 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 PEG10Q86TG7 708 aaKnown RBP5.73□□□□□ -1.49
SCAF4-204ENST00000467731 LINC00596Q86U02 117 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 IZUMO1Q8IYV9 350 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 DUSP18Q8NEJ0 188 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 OR56B1Q8NGI3 324 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 TMEM208Q9BTX3 173 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 PRRC2AP48634 2157 aaKnown RBP5.73□□□□□ -1.49
SCAF4-204ENST00000467731 FOXI3A8MTJ6 420 aaPredicted RBP5.73□□□□□ -1.49
SCAF4-204ENST00000467731 SIRPB1O00241 398 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 SH2D1BO14796 132 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 SLC25A17O43808 307 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 SNAPC5O75971 98 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 STAG3L3P0CL85 134 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 AMY2BP19961 511 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 TMEM33P57088 247 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 MPV17LQ2QL34 196 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 DEFB113Q30KQ7 82 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 PLAC9Q5JTB6 97 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 NKAPLQ5M9Q1 402 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 TMEM69Q5SWH9 247 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 HACD4Q5VWC8 232 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 Q6P435 159 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 TMEM88Q6PEY1 159 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 BRICD5Q6PL45 260 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 C6orf201Q7Z4U5 140 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 CD177Q8N6Q3 437 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 OR10R2Q8NGX6 335 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 RXFP4Q8TDU9 374 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 ARHGAP5-AS1Q96IT6 56 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 BARX1Q9HBU1 254 aaPredicted RBP5.73□□□□□ -1.49
SCAF4-204ENST00000467731 METRNQ9UJH8 293 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 ZNF222Q9UK12 451 aa5.73□□□□□ -1.49
SCAF4-204ENST00000467731 MYO9AB2RTY4 2548 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 CREBBPQ92793 2442 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 ITPR3Q14573 2671 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 TRAV24A0A0B4J272 114 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 A0A1B0GW55 424 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 FAM90A10PA6NDY2 464 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 FAM90A18PA6NE21 464 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 FAM90A16PA6NEW6 464 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 FAM90A20PA6NIJ5 464 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 FAM90A8PA6NJQ4 464 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 FAM90A7PA6NKC0 464 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 FAM90A22PA8MWA6 464 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 FAM90A12PA8MX19 464 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 FAM90A5PA8MXJ8 464 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 FAM90A23PA8MXZ1 464 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 SLC33A1O00400 549 aaPredicted RBP5.72□□□□□ -1.49
SCAF4-204ENST00000467731 DEGS1O15121 323 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 TMPRSS2O15393 492 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 XRCC3O43542 346 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 PSPNO60542 156 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 HEXAP06865 529 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 CHRM2P08172 466 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 FAM90A15PP0C7V4 464 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 FAM90A13PP0C7W8 464 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 FAM90A14PP0C7W9 464 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 FAM90A24PP0C7X0 464 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 DUX4L2P0CJ85 424 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 DUX4L3P0CJ86 424 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 DUX4L4P0CJ87 422 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 DUX4L5P0CJ88 424 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 DUX4L6P0CJ89 424 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 DUX4L7P0CJ90 424 aa5.72□□□□□ -1.49
SCAF4-204ENST00000467731 GNB3P16520 340 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms