RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 GSX2Q9BZM3 304 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 LPAR3Q9UBY5 353 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 JPT1Q9UK76 154 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 TRBV23-1A0A0A0MS06 115 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 FAM172BPA6NC97 362 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 SNRPGP15A8MWD9 76 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 GPR37O15354 613 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 IGLV2-14P01704 120 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 IGHV2-5P01817 119 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 PGAM2P15259 253 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 CCL3L1P16619 93 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 OMGP23515 440 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 PPP1CCP36873 323 aaKnown RBP10.7□□□□□ -0.7
COL4A1-202ENST00000467182 ERVFRD-1P60508 538 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 HERV-K104P61576 105 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 LMO4P61968 165 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 SUPT4H1P63272 117 aaKnown RBP10.7□□□□□ -0.7
COL4A1-202ENST00000467182 PPP1R1AQ13522 171 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 METTL11BQ5VVY1 283 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 FAHD2BQ6P2I3 314 aaPredicted RBP10.7□□□□□ -0.7
COL4A1-202ENST00000467182 SLC38A6Q8IZM9 456 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 C11orf42Q8N5U0 333 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 LY6G5BQ8NDX9 201 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 C10orf105Q8TEF2 133 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 FAHD2AQ96GK7 314 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 BPESC1Q9GZL8 116 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 OR51J1Q9H342 316 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 BARX1Q9HBU1 254 aaPredicted RBP10.7□□□□□ -0.7
COL4A1-202ENST00000467182 OR2S2Q9NQN1 319 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 IDI2-AS1Q9NZ38 188 aa10.7□□□□□ -0.7
COL4A1-202ENST00000467182 HELZ2Q9BYK8 2649 aaKnown RBP10.69□□□□□ -0.7
COL4A1-202ENST00000467182 HMX3A6NHT5 357 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 KIAA1324LA8MWY0 1029 aaPredicted RBP10.69□□□□□ -0.7
COL4A1-202ENST00000467182 C22orf46C9J442 243 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 YPEL1O60688 119 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 ATP5J2P56134 94 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 TAS2R31P59538 309 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 UBE2MP61081 183 aaKnown RBP10.69□□□□□ -0.7
COL4A1-202ENST00000467182 LTC4SQ16873 150 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 MORN2Q502X0 79 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 PRAMEF5Q5TYX0 476 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 ZNF818PQ6ZRF7 136 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 NLRC3Q7RTR2 1065 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 FAM185AQ8N0U4 392 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 OR10A7Q8NGE5 316 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 OR10V1Q8NGI7 309 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 CLDND2Q8NHS1 167 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 ZFAND1Q8TCF1 268 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 SECTM1Q8WVN6 248 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 C5orf30Q96GV9 206 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 ZNF486Q96H40 463 aaPredicted RBP10.69□□□□□ -0.7
COL4A1-202ENST00000467182 ZNF714Q96N38 554 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 YPEL2Q96QA6 119 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 NEURL2Q9BR09 285 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 NARFLQ9H6Q4 476 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 CCL28Q9NRJ3 127 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 GFOD1Q9NXC2 390 aa10.69□□□□□ -0.7
COL4A1-202ENST00000467182 RPUSD1Q9UJJ7 312 aaKnown RBP10.69□□□□□ -0.7
COL4A1-202ENST00000467182 DOPEY2Q9Y3R5 2298 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 C9orf170A2RU37 121 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 CRYM-AS1A6NIL9 109 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 C17orf98A8MV24 154 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 NDUFS8O00217 210 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 PHF1O43189 567 aaPredicted RBP10.68□□□□□ -0.7
COL4A1-202ENST00000467182 HSPA12AO43301 675 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 TRAPPC2P0DI81 140 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 TRAPPC2BP0DI82 140 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 AKR1C4P17516 323 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 LUMP51884 338 aaPredicted RBP10.68□□□□□ -0.7
COL4A1-202ENST00000467182 ZNF134P52741 427 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 RND3P61587 244 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 RRAS2P62070 204 aaPredicted RBP10.68□□□□□ -0.7
COL4A1-202ENST00000467182 CBX3Q13185 183 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 DHRS2Q13268 280 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 TMEM30BQ3MIR4 351 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 C4orf46Q504U0 113 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 TMEM128Q5BJH2 165 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 LY6G6FQ5SQ64 297 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 HEPN1Q6WQI6 88 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 LYG2Q86SG7 212 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 ZNF439Q8NDP4 499 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 OR52M1Q8NGK5 317 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 ZNF431Q8TF32 576 aaPredicted RBP10.68□□□□□ -0.7
COL4A1-202ENST00000467182 FAM168AQ92567 244 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 PERPQ96FX8 193 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 AGMATQ9BSE5 352 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 SLC5A7Q9GZV3 580 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 GAL3ST2Q9H3Q3 398 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 RAB9BQ9NP90 201 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 SLC2A9Q9NRM0 540 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 C14orf166Q9Y224 244 aaKnown RBP10.68□□□□□ -0.7
COL4A1-202ENST00000467182 AKAP6Q13023 2319 aa10.68□□□□□ -0.7
COL4A1-202ENST00000467182 GPR31O00270 319 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 ITGB1BP1O14713 200 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 HSD17B6O14756 317 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 SLC31A2O15432 143 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 SFT2D2O95562 160 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 OR8U9P0C7N5 309 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 SULT1A3P0DMM9 295 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 SULT1A4P0DMN0 295 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms