RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 LECT2O14960 151 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 OR13C7P0DN81 318 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 OR12D1P0DN82 309 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 CTSEP14091 401 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 PSMB3P49720 205 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 FOXA1P55317 472 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 C1QTNF8P60827 252 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 MAPK14Q16539 360 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 ZCWPW2Q504Y3 356 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 WDR59Q6PJI9 974 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 LYPD6Q86Y78 171 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 HS3ST5Q8IZT8 346 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 MUC7Q8TAX7 377 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 SLC37A2Q8TED4 501 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 CYGBQ8WWM9 190 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 HIST1H2BAQ96A08 127 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 GALMQ96C23 342 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 CMTM5Q96DZ9 223 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 TRIB3Q96RU7 358 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 BCL2L14Q9BZR8 327 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 GTSF1LQ9H1H1 148 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 ZNF286AQ9HBT8 521 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 TAS2R1Q9NYW7 299 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 TMEM216Q9P0N5 145 aa2.16□□□□□ -2.06
VPS13A-209ENST00000467124 RPUSD1Q9UJJ7 312 aaKnown RBP2.16□□□□□ -2.06
VPS13A-209ENST00000467124 C4orf51C9J302 202 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 SLC31A1O15431 190 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 SH2D1AO60880 128 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 HBZP02008 142 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 HPCAP84074 193 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 DHRS2Q13268 280 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 MMDQ15546 238 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 HSP90B2PQ58FF3 399 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 C10orf91Q5T1B1 145 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 LCE3AQ5TA76 89 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 AMMECR1LQ6DCA0 310 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 DNM1P34Q6PK57 102 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 SCXQ7RTU7 201 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 CPNE9Q8IYJ1 553 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 TMEM156Q8N614 296 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 LMX1AQ8TE12 382 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 ARL5BQ96KC2 179 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 KCTD7Q96MP8 289 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 RTBDNQ9BSG5 229 aaPredicted RBP2.15□□□□□ -2.07
VPS13A-209ENST00000467124 MED18Q9BUE0 208 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 TIPINQ9BVW5 301 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 DERL2Q9GZP9 239 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 C11orf49Q9H6J7 331 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 LINC00527Q9UJ94 153 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 ZNF391Q9UJN7 358 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 DNAJC12Q9UKB3 198 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 TP53TG1Q9Y2A0 90 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 CARHSP1Q9Y2V2 147 aaKnown RBP2.15□□□□□ -2.07
VPS13A-209ENST00000467124 WASHC3Q9Y3C0 194 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 LINC00588Q9Y4M8 146 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 MTCH2Q9Y6C9 303 aa2.15□□□□□ -2.07
VPS13A-209ENST00000467124 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.14□□□□□ -2.07
VPS13A-209ENST00000467124 TRBV24-1A0A075B6N3 115 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 IGKV2-24A0A0C4DH68 120 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 M0QZ92 97 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 SLC25A20O43772 301 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 NIPSNAP2O75323 286 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 DEXIO95424 95 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 TYMSP04818 313 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 PSKH1P11801 424 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 HIST1H1CP16403 213 aaKnown RBP2.14□□□□□ -2.07
VPS13A-209ENST00000467124 ZNF22P17026 224 aaPredicted RBP2.14□□□□□ -2.07
VPS13A-209ENST00000467124 CFL1P23528 166 aaKnown RBP2.14□□□□□ -2.07
VPS13A-209ENST00000467124 ITGB3BPQ13352 177 aaPredicted RBP2.14□□□□□ -2.07
VPS13A-209ENST00000467124 PPP1R1AQ13522 171 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 IGFBP7Q16270 282 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 NOXRED1Q6NXP6 359 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 Q6ZQT7 251 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 BPIFB6Q8NFQ5 453 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 OR5K1Q8NHB7 308 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 OR5P3Q8WZ94 311 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 SMIM19Q96E16 107 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 PYURFQ96I23 114 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 OR52B2Q96RD2 323 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 CDCA4Q9BXL8 241 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 HDGFL3Q9Y3E1 203 aa2.14□□□□□ -2.07
VPS13A-209ENST00000467124 COL4A4P53420 1690 aaPredicted RBP2.14□□□□□ -2.07
VPS13A-209ENST00000467124 H0Y980 276 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 MRASO14807 208 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 PFDN6O15212 129 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 STX10O60499 249 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 CPSF4O95639 269 aaKnown RBP2.13□□□□□ -2.07
VPS13A-209ENST00000467124 ATP5G1P05496 136 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 LINC00614P0C842 121 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 CD36P16671 472 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 CRABP1P29762 137 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 MAGEA2P43356 314 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 LINC00313P59037 77 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 TMEM267Q0VDI3 215 aaPredicted RBP2.13□□□□□ -2.07
VPS13A-209ENST00000467124 MLLT11Q13015 90 aaPredicted RBP2.13□□□□□ -2.07
VPS13A-209ENST00000467124 IHHQ14623 411 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 PDK2Q15119 407 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 CLEC12BQ2HXU8 276 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 ZFAND6Q6FIF0 208 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 SCGB1D4Q6XE38 83 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms