RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	OPN4	Q9UHM6	478 aa		7.29	□□□□□ -1.24
UBA3-208	ENST00000465627	SCP2D1	Q9UJQ7	156 aa		7.29	□□□□□ -1.24
UBA3-208	ENST00000465627	MGAT4A	Q9UM21	535 aa		7.29	□□□□□ -1.24
UBA3-208	ENST00000465627	PCDHB10	Q9UN67	800 aa		7.29	□□□□□ -1.24
UBA3-208	ENST00000465627	ALG5	Q9Y673	324 aa		7.29	□□□□□ -1.24
UBA3-208	ENST00000465627	USF3	Q68DE3	2245 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	PRKDC	P78527	4128 aa	Known RBP	7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	hCG_2014768	A0A024R1R8	64 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627		A0A0A6YYJ9	748 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627		F5H0A9	414 aa	Predicted RBP	7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	NDUFA2	O43678	99 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	CTXN2	P0C2S0	81 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	DAO	P14920	347 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	ANXA7	P20073	488 aa	Known RBP	7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	FPR2	P25090	351 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	CDKN1A	P38936	164 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	OR3A3	P47888	321 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	EFNA4	P52798	201 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	UCP3	P55916	312 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	SURF2	Q15527	256 aa	Predicted RBP	7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	C17orf58	Q2M2W7	97 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	SLC25A42	Q86VD7	318 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	H1FOO	Q8IZA3	346 aa	Predicted RBP	7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	TPRX1	Q8N7U7	411 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	WFDC11	Q8NEX6	87 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	TMEM185A	Q8NFB2	350 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	PPP1R35	Q8TAP8	253 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	CCDC107	Q8WV48	283 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	TMEM230	Q96A57	120 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	MOB3A	Q96BX8	217 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	C5orf66	Q9H5L9	145 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	TAF9B	Q9HBM6	251 aa		7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	CHMP1A	Q9HD42	196 aa	Predicted RBP	7.28	□□□□□ -1.24
UBA3-208	ENST00000465627	MEIKIN	A0A087WXM9	373 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	F2RL2	O00254	374 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	TMPRSS2	O15393	492 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	PRAF2	O60831	178 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	HBZ	P02008	142 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	IFNA6	P05013	189 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	AADAC	P22760	399 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	ZBTB25	P24278	435 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	FCGR2C	P31995	323 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	DLX6	P56179	175 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	TMEM33	P57088	247 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	RAB25	P57735	213 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	LOXL3	P58215	753 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	ARPC4	P59998	168 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	SUPT4H1	P63272	117 aa	Known RBP	7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	SCGB2B2	Q4G0G5	96 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	TMEM155	Q4W5P6	130 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	FAHD2B	Q6P2I3	314 aa	Predicted RBP	7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	GLDN	Q6ZMI3	551 aa	Predicted RBP	7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	ADAD2	Q8NCV1	583 aa	Known RBP	7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	OR6F1	Q8NGZ6	308 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	OR1L1	Q8NH94	360 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	MARCH1	Q8TCQ1	289 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	FAHD2A	Q96GK7	314 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	KIRREL1	Q96J84	757 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	ZNF2	Q9BSG1	426 aa	Predicted RBP	7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	TMPRSS13	Q9BYE2	586 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	PARP12	Q9H0J9	701 aa	Known RBP	7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	CHODL	Q9H9P2	273 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	OR1A1	Q9P1Q5	309 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	TRAPPC2L	Q9UL33	140 aa		7.27	□□□□□ -1.25
UBA3-208	ENST00000465627	BIRC6	Q9NR09	4857 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	WNK1	Q9H4A3	2382 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	IGKV1D-13	A0A0B4J2D9	117 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	NKX6-3	A6NJ46	265 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	SNRPGP15	A8MWD9	76 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	ADAM20	O43506	726 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	DHFR	P00374	187 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	PPY	P01298	95 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	IGLV2-14	P01704	120 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	IGHV4-39	P01824	125 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	WNT2	P09544	360 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	TRAPPC2	P0DI81	140 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	TRAPPC2B	P0DI82	140 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	IGKV1-13	P0DP09	117 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	GZMH	P20718	246 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	NFYA	P23511	347 aa	Predicted RBP	7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	SSTR5	P35346	364 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	NPY4R	P50391	375 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	SEC61A1	P61619	476 aa	Known RBP	7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	HTD2	P86397	168 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	MEF2C	Q06413	473 aa	Predicted RBP	7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	KCNJ8	Q15842	424 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	C6orf183	Q5T699	404 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	ZNF626	Q68DY1	528 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	FAM53A	Q6NSI3	398 aa	Predicted RBP	7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	TRAT1	Q6PIZ9	186 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	C8orf86	Q6ZUL3	223 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	TMEM17	Q86X19	198 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	MRGPRD	Q8TDS7	321 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	CAPSL	Q8WWF8	208 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	RSRP1	Q9BUV0	290 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	OR6C3	Q9NZP0	311 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	SLC25A10	Q9UBX3	287 aa	Predicted RBP	7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	SLC23A1	Q9UHI7	598 aa		7.26	□□□□□ -1.25
UBA3-208	ENST00000465627	KBTBD11-OT1	A0A1B0GTJ5	212 aa		7.25	□□□□□ -1.25
UBA3-208	ENST00000465627	DVL1	O14640	695 aa		7.25	□□□□□ -1.25

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