RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 FAM90A7PA6NKC0 464 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 FAM90A23PA8MXZ1 464 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 TXNL1O43396 289 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 CA11O75493 328 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 SC5DO75845 299 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 MGMTP16455 207 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 FUT3P21217 361 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 CAPGP40121 348 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 FOXE3Q13461 319 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 DEFB136Q30KP8 78 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 TMEM30BQ3MIR4 351 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 STEAP3Q658P3 488 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 LAIR2Q6ISS4 152 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 TRAT1Q6PIZ9 186 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 RNF152Q8N8N0 203 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 TFAP2CQ92754 450 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 DERL3Q96Q80 235 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 B9D2Q9BPU9 175 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 TAF9BQ9HBM6 251 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 OR2S2Q9NQN1 319 aa16.34■□□□□ 0.21
CSPG5-204ENST00000465441 EFCAB10A6NFE3 127 aa16.33■□□□□ 0.2
CSPG5-204ENST00000465441 RRP9O43818 475 aaKnown RBP16.33■□□□□ 0.2
CSPG5-204ENST00000465441 CRTAPO75718 401 aaPredicted RBP16.33■□□□□ 0.2
CSPG5-204ENST00000465441 GLAP06280 429 aa16.33■□□□□ 0.2
CSPG5-204ENST00000465441 CELP19835 753 aa16.33■□□□□ 0.2
CSPG5-204ENST00000465441 SOX6P35712 828 aa16.33■□□□□ 0.2
CSPG5-204ENST00000465441 TAS2R43P59537 309 aa16.33■□□□□ 0.2
CSPG5-204ENST00000465441 DGCR2P98153 550 aa16.33■□□□□ 0.2
CSPG5-204ENST00000465441 CFHR3Q02985 330 aa16.33■□□□□ 0.2
CSPG5-204ENST00000465441 DOC2BQ14184 412 aa16.33■□□□□ 0.2
CSPG5-204ENST00000465441 OR52L2PQ8NGH6 319 aa16.33■□□□□ 0.2
CSPG5-204ENST00000465441 Q96M66 194 aa16.33■□□□□ 0.2
CSPG5-204ENST00000465441 MBNL3Q9NUK0 354 aaKnown RBP16.33■□□□□ 0.2
CSPG5-204ENST00000465441 ZMAT5Q9UDW3 170 aaKnown RBP16.33■□□□□ 0.2
CSPG5-204ENST00000465441 LANCL1O43813 399 aa16.32■□□□□ 0.2
CSPG5-204ENST00000465441 IGHG4P01861 327 aa16.32■□□□□ 0.2
CSPG5-204ENST00000465441 CD1AP06126 327 aa16.32■□□□□ 0.2
CSPG5-204ENST00000465441 VDAC1P21796 283 aa16.32■□□□□ 0.2
CSPG5-204ENST00000465441 GP2P55259 537 aaKnown RBP16.32■□□□□ 0.2
CSPG5-204ENST00000465441 PACRGLQ8N7B6 248 aa16.32■□□□□ 0.2
CSPG5-204ENST00000465441 OR8U1Q8NH10 309 aa16.32■□□□□ 0.2
CSPG5-204ENST00000465441 KCNIP1Q9NZI2 227 aa16.32■□□□□ 0.2
CSPG5-204ENST00000465441 CNOT2Q9NZN8 540 aaKnown RBP16.32■□□□□ 0.2
CSPG5-204ENST00000465441 RAMP3O60896 148 aa16.31■□□□□ 0.2
CSPG5-204ENST00000465441 IGF1P05019 195 aa16.31■□□□□ 0.2
CSPG5-204ENST00000465441 LSAMPQ13449 338 aa16.31■□□□□ 0.2
CSPG5-204ENST00000465441 GNMTQ14749 295 aa16.31■□□□□ 0.2
CSPG5-204ENST00000465441 ODF3L1Q8IXM7 274 aa16.31■□□□□ 0.2
CSPG5-204ENST00000465441 MRPL30Q8TCC3 161 aaKnown RBP16.31■□□□□ 0.2
CSPG5-204ENST00000465441 RITA1Q96K30 269 aa16.31■□□□□ 0.2
CSPG5-204ENST00000465441 KCTD7Q96MP8 289 aa16.31■□□□□ 0.2
CSPG5-204ENST00000465441 C8orf4Q9NR00 106 aa16.31■□□□□ 0.2
CSPG5-204ENST00000465441 PSORS1C1Q9UIG5 152 aa16.31■□□□□ 0.2
CSPG5-204ENST00000465441 PDCD6O75340 191 aa16.3■□□□□ 0.2
CSPG5-204ENST00000465441 WNT4P56705 351 aa16.3■□□□□ 0.2
CSPG5-204ENST00000465441 NANOGP1Q8N7R0 232 aa16.3■□□□□ 0.2
CSPG5-204ENST00000465441 OR5M8Q8NGP6 311 aa16.3■□□□□ 0.2
CSPG5-204ENST00000465441 FAM46BQ96A09 425 aa16.3■□□□□ 0.2
CSPG5-204ENST00000465441 UQCC2Q9BRT2 126 aa16.3■□□□□ 0.2
CSPG5-204ENST00000465441 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.3■□□□□ 0.2
CSPG5-204ENST00000465441 PLCXD1Q9NUJ7 323 aa16.3■□□□□ 0.2
CSPG5-204ENST00000465441 GHRLQ9UBU3 117 aa16.3■□□□□ 0.2
CSPG5-204ENST00000465441 ZNF107Q9UII5 783 aaPredicted RBP16.3■□□□□ 0.2
CSPG5-204ENST00000465441 GNAO1P09471 354 aa16.29■□□□□ 0.2
CSPG5-204ENST00000465441 SLC2A2P11168 524 aaPredicted RBP16.29■□□□□ 0.2
CSPG5-204ENST00000465441 MYF6P23409 242 aa16.29■□□□□ 0.2
CSPG5-204ENST00000465441 PSMB8P28062 276 aa16.29■□□□□ 0.2
CSPG5-204ENST00000465441 LUMP51884 338 aaPredicted RBP16.29■□□□□ 0.2
CSPG5-204ENST00000465441 HTD2P86397 168 aa16.29■□□□□ 0.2
CSPG5-204ENST00000465441 MMDQ15546 238 aa16.29■□□□□ 0.2
CSPG5-204ENST00000465441 C9orf66Q5T8R8 295 aa16.29■□□□□ 0.2
CSPG5-204ENST00000465441 AHSA2Q719I0 299 aa16.29■□□□□ 0.2
CSPG5-204ENST00000465441 ZNF554Q86TJ5 538 aa16.29■□□□□ 0.2
CSPG5-204ENST00000465441 C8orf59Q8N0T1 100 aaPredicted RBP16.29■□□□□ 0.2
CSPG5-204ENST00000465441 NKAIN3Q8N8D7 197 aa16.29■□□□□ 0.2
CSPG5-204ENST00000465441 BPIFB6Q8NFQ5 453 aa16.29■□□□□ 0.2
CSPG5-204ENST00000465441 NABP2Q9BQ15 211 aa16.29■□□□□ 0.2
CSPG5-204ENST00000465441 ABHD14AQ9BUJ0 271 aa16.29■□□□□ 0.2
CSPG5-204ENST00000465441 JPT1Q9UK76 154 aa16.29■□□□□ 0.2
CSPG5-204ENST00000465441 MYL12BO14950 172 aa16.28■□□□□ 0.2
CSPG5-204ENST00000465441 YPEL1O60688 119 aa16.28■□□□□ 0.2
CSPG5-204ENST00000465441 CNTFRP26992 372 aa16.28■□□□□ 0.2
CSPG5-204ENST00000465441 PPIFP30405 207 aaKnown RBP16.28■□□□□ 0.2
CSPG5-204ENST00000465441 PPP1CCP36873 323 aaKnown RBP16.28■□□□□ 0.2
CSPG5-204ENST00000465441 ACTBP60709 375 aa16.28■□□□□ 0.2
CSPG5-204ENST00000465441 DCTN2Q13561 401 aaKnown RBP16.28■□□□□ 0.2
CSPG5-204ENST00000465441 KIAA0141Q14154 515 aaPredicted RBP16.28■□□□□ 0.2
CSPG5-204ENST00000465441 INSL4Q14641 139 aa16.28■□□□□ 0.2
CSPG5-204ENST00000465441 NKAPLQ5M9Q1 402 aa16.28■□□□□ 0.2
CSPG5-204ENST00000465441 FBLIM1Q8WUP2 373 aa16.28■□□□□ 0.2
CSPG5-204ENST00000465441 C4orf3Q8WVX3 66 aa16.28■□□□□ 0.2
CSPG5-204ENST00000465441 YPEL2Q96QA6 119 aa16.28■□□□□ 0.2
CSPG5-204ENST00000465441 CHCHD6Q9BRQ6 235 aa16.28■□□□□ 0.2
CSPG5-204ENST00000465441 SCOCQ9UIL1 159 aa16.28■□□□□ 0.2
CSPG5-204ENST00000465441 ZNF580Q9UK33 172 aa16.28■□□□□ 0.2
CSPG5-204ENST00000465441 WSB1Q9Y6I7 421 aa16.28■□□□□ 0.2
CSPG5-204ENST00000465441 OR5H8P0DN80 308 aa16.27■□□□□ 0.2
CSPG5-204ENST00000465441 MAPK3P27361 379 aaPredicted RBP16.27■□□□□ 0.2
CSPG5-204ENST00000465441 ACSM3Q53FZ2 586 aa16.27■□□□□ 0.2
CSPG5-204ENST00000465441 LY6G6FQ5SQ64 297 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms