RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 PSG11Q9UQ72 335 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 ATRQ13535 2644 aa13.74□□□□□ -0.21
USP39-211ENST00000465282 TRAV18A0A075B6X5 111 aa13.74□□□□□ -0.21
USP39-211ENST00000465282 SMIM31A0A1B0GVY4 71 aa13.74□□□□□ -0.21
USP39-211ENST00000465282 OOSP1A8MZH6 123 aa13.74□□□□□ -0.21
USP39-211ENST00000465282 TRDCB7Z8K6 153 aa13.74□□□□□ -0.21
USP39-211ENST00000465282 BUB1B-PAK6H3BSN5 160 aa13.74□□□□□ -0.21
USP39-211ENST00000465282 YPEL1O60688 119 aa13.74□□□□□ -0.21
USP39-211ENST00000465282 FCGR3AP08637 254 aa13.74□□□□□ -0.21
USP39-211ENST00000465282 ARHGDIBP52566 201 aa13.74□□□□□ -0.21
USP39-211ENST00000465282 HLA-DRB3P79483 266 aa13.74□□□□□ -0.21
USP39-211ENST00000465282 LTC4SQ16873 150 aa13.74□□□□□ -0.21
USP39-211ENST00000465282 Q6ZPA2 131 aa13.74□□□□□ -0.21
USP39-211ENST00000465282 ZDHHC22Q8N966 263 aa13.74□□□□□ -0.21
USP39-211ENST00000465282 DYNC2LI1Q8TCX1 351 aa13.74□□□□□ -0.21
USP39-211ENST00000465282 YPEL2Q96QA6 119 aa13.74□□□□□ -0.21
USP39-211ENST00000465282 CCDC59Q9P031 241 aaKnown RBP13.74□□□□□ -0.21
USP39-211ENST00000465282 NDUFA13Q9P0J0 144 aa13.74□□□□□ -0.21
USP39-211ENST00000465282 MDFIC2A0A1B0GVS7 189 aa13.73□□□□□ -0.21
USP39-211ENST00000465282 VGLL3A8MV65 326 aa13.73□□□□□ -0.21
USP39-211ENST00000465282 VENTXO95231 258 aa13.73□□□□□ -0.21
USP39-211ENST00000465282 MNDAP41218 407 aa13.73□□□□□ -0.21
USP39-211ENST00000465282 IER3P46695 156 aa13.73□□□□□ -0.21
USP39-211ENST00000465282 GNG2P59768 71 aa13.73□□□□□ -0.21
USP39-211ENST00000465282 MADCAM1Q13477 382 aa13.73□□□□□ -0.21
USP39-211ENST00000465282 MORN2Q502X0 79 aa13.73□□□□□ -0.21
USP39-211ENST00000465282 TMEM69Q5SWH9 247 aa13.73□□□□□ -0.21
USP39-211ENST00000465282 CCDC144NLQ6NUI1 221 aa13.73□□□□□ -0.21
USP39-211ENST00000465282 LHFPL4Q7Z7J7 247 aa13.73□□□□□ -0.21
USP39-211ENST00000465282 OR4A4PQ8NGN8 299 aa13.73□□□□□ -0.21
USP39-211ENST00000465282 OR5R1Q8NH85 324 aa13.73□□□□□ -0.21
USP39-211ENST00000465282 OCSTAMPQ9BR26 566 aa13.73□□□□□ -0.21
USP39-211ENST00000465282 ESM1Q9NQ30 184 aa13.73□□□□□ -0.21
USP39-211ENST00000465282 FAM172BPA6NC97 362 aa13.72□□□□□ -0.21
USP39-211ENST00000465282 BTBD17A6NE02 478 aa13.72□□□□□ -0.21
USP39-211ENST00000465282 TMEM235A6NFC5 223 aa13.72□□□□□ -0.21
USP39-211ENST00000465282 CCDC160A6NGH7 325 aa13.72□□□□□ -0.21
USP39-211ENST00000465282 DNAJC9-AS1A6NH13 148 aa13.72□□□□□ -0.21
USP39-211ENST00000465282 LY6LH3BQJ8 138 aa13.72□□□□□ -0.21
USP39-211ENST00000465282 HOXA3O43365 443 aaPredicted RBP13.72□□□□□ -0.21
USP39-211ENST00000465282 TPPPO94811 219 aa13.72□□□□□ -0.21
USP39-211ENST00000465282 ZBTB25P24278 435 aa13.72□□□□□ -0.21
USP39-211ENST00000465282 DYNLT3P51808 116 aa13.72□□□□□ -0.21
USP39-211ENST00000465282 SLC9A3R2Q15599 337 aa13.72□□□□□ -0.21
USP39-211ENST00000465282 SSX2Q16385 188 aa13.72□□□□□ -0.21
USP39-211ENST00000465282 LRRC75BQ2VPJ9 315 aa13.72□□□□□ -0.21
USP39-211ENST00000465282 SLC25A48Q6ZT89 311 aaKnown RBP13.72□□□□□ -0.21
USP39-211ENST00000465282 OR10X1Q8NGY0 326 aa13.72□□□□□ -0.21
USP39-211ENST00000465282 UBALD1Q8TB05 177 aa13.72□□□□□ -0.21
USP39-211ENST00000465282 IL1F10Q8WWZ1 152 aa13.72□□□□□ -0.21
USP39-211ENST00000465282 RBM38Q9H0Z9 239 aaKnown RBP13.72□□□□□ -0.21
USP39-211ENST00000465282 AUNIPQ9H7T9 357 aa13.72□□□□□ -0.21
USP39-211ENST00000465282 RSL24D1Q9UHA3 163 aaKnown RBP13.72□□□□□ -0.21
USP39-211ENST00000465282 ITGB1BP1O14713 200 aa13.71□□□□□ -0.21
USP39-211ENST00000465282 RNASE1P07998 156 aaKnown RBP13.71□□□□□ -0.21
USP39-211ENST00000465282 IL3RAP26951 378 aa13.71□□□□□ -0.21
USP39-211ENST00000465282 CBX5P45973 191 aa13.71□□□□□ -0.21
USP39-211ENST00000465282 RPL15P61313 204 aaKnown RBP13.71□□□□□ -0.21
USP39-211ENST00000465282 UBA52P62987 128 aaKnown RBP13.71□□□□□ -0.21
USP39-211ENST00000465282 LDLRAD2Q5SZI1 272 aa13.71□□□□□ -0.21
USP39-211ENST00000465282 ZNF439Q8NDP4 499 aa13.71□□□□□ -0.21
USP39-211ENST00000465282 FAM216AQ8WUB2 273 aa13.71□□□□□ -0.21
USP39-211ENST00000465282 C17orf50Q8WW18 174 aa13.71□□□□□ -0.21
USP39-211ENST00000465282 TMEM158Q8WZ71 300 aa13.71□□□□□ -0.21
USP39-211ENST00000465282 LEAP2Q969E1 77 aa13.71□□□□□ -0.21
USP39-211ENST00000465282 SSX3Q99909 188 aa13.71□□□□□ -0.21
USP39-211ENST00000465282 GHITMQ9H3K2 345 aa13.71□□□□□ -0.21
USP39-211ENST00000465282 ADAM30Q9UKF2 790 aa13.71□□□□□ -0.21
USP39-211ENST00000465282 IGHV3-43A0A0B4J1X8 118 aa13.7□□□□□ -0.22
USP39-211ENST00000465282 FABP7O15540 132 aa13.7□□□□□ -0.22
USP39-211ENST00000465282 HPGDSO60760 199 aa13.7□□□□□ -0.22
USP39-211ENST00000465282 EIF4EP06730 217 aaKnown RBP13.7□□□□□ -0.22
USP39-211ENST00000465282 LPLP06858 475 aa13.7□□□□□ -0.22
USP39-211ENST00000465282 SCTP09683 121 aa13.7□□□□□ -0.22
USP39-211ENST00000465282 CTXN2P0C2S0 81 aa13.7□□□□□ -0.22
USP39-211ENST00000465282 IGHV3-43DP0DP04 118 aa13.7□□□□□ -0.22
USP39-211ENST00000465282 ELK1P19419 428 aa13.7□□□□□ -0.22
USP39-211ENST00000465282 GNG10P50151 68 aa13.7□□□□□ -0.22
USP39-211ENST00000465282 RAB7AP51149 207 aa13.7□□□□□ -0.22
USP39-211ENST00000465282 ZNF137PP52743 207 aa13.7□□□□□ -0.22
USP39-211ENST00000465282 UTF1Q5T230 341 aa13.7□□□□□ -0.22
USP39-211ENST00000465282 TPTE2P1Q5T6R2 138 aa13.7□□□□□ -0.22
USP39-211ENST00000465282 OR52L2PQ8NGH6 319 aa13.7□□□□□ -0.22
USP39-211ENST00000465282 C15orf40Q8WUR7 153 aa13.7□□□□□ -0.22
USP39-211ENST00000465282 EDARADDQ8WWZ3 215 aa13.7□□□□□ -0.22
USP39-211ENST00000465282 RPEQ96AT9 228 aa13.7□□□□□ -0.22
USP39-211ENST00000465282 ELF5Q9UKW6 265 aaPredicted RBP13.7□□□□□ -0.22
USP39-211ENST00000465282 HSPA12AO43301 675 aa13.69□□□□□ -0.22
USP39-211ENST00000465282 IGHV3-7P01780 117 aa13.69□□□□□ -0.22
USP39-211ENST00000465282 IGHV4-59P01825 116 aa13.69□□□□□ -0.22
USP39-211ENST00000465282 BRS3P32247 399 aa13.69□□□□□ -0.22
USP39-211ENST00000465282 TAS2R20P59543 309 aa13.69□□□□□ -0.22
USP39-211ENST00000465282 CT45A1Q5HYN5 189 aa13.69□□□□□ -0.22
USP39-211ENST00000465282 C16orf87Q6PH81 154 aa13.69□□□□□ -0.22
USP39-211ENST00000465282 LIAT1Q6ZQX7 453 aa13.69□□□□□ -0.22
USP39-211ENST00000465282 OR8H3Q8N146 312 aa13.69□□□□□ -0.22
USP39-211ENST00000465282 OR2AK2Q8NG84 335 aa13.69□□□□□ -0.22
USP39-211ENST00000465282 OR10V1Q8NGI7 309 aa13.69□□□□□ -0.22
USP39-211ENST00000465282 CT45A3Q8NHU0 189 aa13.69□□□□□ -0.22
USP39-211ENST00000465282 NUDCD2Q8WVJ2 157 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms