RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 OR4P4Q8NGL7 312 aa13.77□□□□□ -0.21
VPS52-215ENST00000464425 UBALD1Q8TB05 177 aa13.77□□□□□ -0.21
VPS52-215ENST00000464425 MRPL30Q8TCC3 161 aaKnown RBP13.77□□□□□ -0.21
VPS52-215ENST00000464425 LEAP2Q969E1 77 aa13.77□□□□□ -0.21
VPS52-215ENST00000464425 MBNL3Q9NUK0 354 aaKnown RBP13.77□□□□□ -0.21
VPS52-215ENST00000464425 TRAPPC2LQ9UL33 140 aa13.77□□□□□ -0.21
VPS52-215ENST00000464425 MINOS1-NBL1R4GNA1 71 aa13.77□□□□□ -0.21
VPS52-215ENST00000464425 A3GALT2U3KPV4 340 aa13.77□□□□□ -0.21
VPS52-215ENST00000464425 NPIPB11E5RHQ5 1161 aa13.76□□□□□ -0.21
VPS52-215ENST00000464425 HPGDSO60760 199 aa13.76□□□□□ -0.21
VPS52-215ENST00000464425 EIF4EP06730 217 aaKnown RBP13.76□□□□□ -0.21
VPS52-215ENST00000464425 HTR1DP28221 377 aa13.76□□□□□ -0.21
VPS52-215ENST00000464425 RAG2P55895 527 aa13.76□□□□□ -0.21
VPS52-215ENST00000464425 AANATQ16613 207 aa13.76□□□□□ -0.21
VPS52-215ENST00000464425 PNLIPRP3Q17RR3 467 aa13.76□□□□□ -0.21
VPS52-215ENST00000464425 ZNF260Q3ZCT1 412 aa13.76□□□□□ -0.21
VPS52-215ENST00000464425 HACD4Q5VWC8 232 aa13.76□□□□□ -0.21
VPS52-215ENST00000464425 OLFML2AQ68BL7 652 aa13.76□□□□□ -0.21
VPS52-215ENST00000464425 ZNF880Q6PDB4 577 aa13.76□□□□□ -0.21
VPS52-215ENST00000464425 OR4K15Q8NH41 348 aa13.76□□□□□ -0.21
VPS52-215ENST00000464425 ZNF596Q8TC21 504 aa13.76□□□□□ -0.21
VPS52-215ENST00000464425 PIFOQ8TCI5 191 aa13.76□□□□□ -0.21
VPS52-215ENST00000464425 ARL11Q969Q4 196 aa13.76□□□□□ -0.21
VPS52-215ENST00000464425 CMSS1Q9BQ75 279 aaKnown RBP13.76□□□□□ -0.21
VPS52-215ENST00000464425 C12orf4Q9NQ89 552 aa13.76□□□□□ -0.21
VPS52-215ENST00000464425 TENM1Q9UKZ4 2725 aa13.76□□□□□ -0.21
VPS52-215ENST00000464425 TRAV18A0A075B6X5 111 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 A0A087X0M5 115 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 A0A1B0GX30 115 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 C15orf65H3BRN8 121 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 HAX1O00165 279 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 IGLV1-47P01700 117 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 CD3GP09693 182 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 ELK1P19419 428 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 CD34P28906 385 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 PRRX1P54821 245 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 MRPS15P82914 257 aaKnown RBP13.75□□□□□ -0.21
VPS52-215ENST00000464425 PITPNAQ00169 270 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 C6orf183Q5T699 404 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 DHRS7BQ6IAN0 325 aaPredicted RBP13.75□□□□□ -0.21
VPS52-215ENST00000464425 MOB1BQ7L9L4 216 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 OR10A7Q8NGE5 316 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 OR4F5Q8NH21 305 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 RAB9BQ9NP90 201 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 ABCB10Q9NRK6 738 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 DPM3Q9P2X0 92 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 MGAT4AQ9UM21 535 aa13.75□□□□□ -0.21
VPS52-215ENST00000464425 VGLL3A8MV65 326 aa13.74□□□□□ -0.21
VPS52-215ENST00000464425 CTDSP2O14595 271 aa13.74□□□□□ -0.21
VPS52-215ENST00000464425 TPPPO94811 219 aa13.74□□□□□ -0.21
VPS52-215ENST00000464425 NDUFA7O95182 113 aa13.74□□□□□ -0.21
VPS52-215ENST00000464425 RCC1P18754 421 aaPredicted RBP13.74□□□□□ -0.21
VPS52-215ENST00000464425 GNG10P50151 68 aa13.74□□□□□ -0.21
VPS52-215ENST00000464425 RPL15P61313 204 aaKnown RBP13.74□□□□□ -0.21
VPS52-215ENST00000464425 SRSF7Q16629 238 aaKnown RBP eCLIP13.74□□□□□ -0.21
VPS52-215ENST00000464425 OR9G1Q8NH87 305 aa13.74□□□□□ -0.21
VPS52-215ENST00000464425 MCFD2Q8NI22 146 aa13.74□□□□□ -0.21
VPS52-215ENST00000464425 DCUN1D5Q9BTE7 237 aa13.74□□□□□ -0.21
VPS52-215ENST00000464425 MMP27Q9H306 513 aa13.74□□□□□ -0.21
VPS52-215ENST00000464425 AUNIPQ9H7T9 357 aa13.74□□□□□ -0.21
VPS52-215ENST00000464425 CHMP1AQ9HD42 196 aaPredicted RBP13.74□□□□□ -0.21
VPS52-215ENST00000464425 KCNIP1Q9NZI2 227 aa13.74□□□□□ -0.21
VPS52-215ENST00000464425 PSG11Q9UQ72 335 aa13.74□□□□□ -0.21
VPS52-215ENST00000464425 ANK2Q01484 3957 aa13.73□□□□□ -0.21
VPS52-215ENST00000464425 A0A1W2PPE3 182 aa13.73□□□□□ -0.21
VPS52-215ENST00000464425 LEUTXA8MZ59 168 aa13.73□□□□□ -0.21
VPS52-215ENST00000464425 BUB1B-PAK6H3BSN5 160 aa13.73□□□□□ -0.21
VPS52-215ENST00000464425 J3QR06 171 aa13.73□□□□□ -0.21
VPS52-215ENST00000464425 SDCBPO00560 298 aaPredicted RBP13.73□□□□□ -0.21
VPS52-215ENST00000464425 RGS5O15539 181 aa13.73□□□□□ -0.21
VPS52-215ENST00000464425 ARFRP1Q13795 201 aa13.73□□□□□ -0.21
VPS52-215ENST00000464425 HLA-DRB5Q30154 266 aa13.73□□□□□ -0.21
VPS52-215ENST00000464425 TMEM69Q5SWH9 247 aa13.73□□□□□ -0.21
VPS52-215ENST00000464425 FAM53AQ6NSI3 398 aaPredicted RBP13.73□□□□□ -0.21
VPS52-215ENST00000464425 Q6ZSV7 163 aa13.73□□□□□ -0.21
VPS52-215ENST00000464425 PRR18Q8N4B5 295 aa13.73□□□□□ -0.21
VPS52-215ENST00000464425 HDHD3Q9BSH5 251 aaPredicted RBP13.73□□□□□ -0.21
VPS52-215ENST00000464425 MIXL1Q9H2W2 232 aa13.73□□□□□ -0.21
VPS52-215ENST00000464425 BEX1Q9HBH7 125 aa13.73□□□□□ -0.21
VPS52-215ENST00000464425 Q9N2K0 584 aa13.73□□□□□ -0.21
VPS52-215ENST00000464425 ADAM30Q9UKF2 790 aa13.73□□□□□ -0.21
VPS52-215ENST00000464425 IGHV3-43A0A0B4J1X8 118 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 TMEM235A6NFC5 223 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 FAM25AB3EWG3 89 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 FAM25CB3EWG5 89 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 FAM25GB3EWG6 89 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 C12orf77C9JDV5 145 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 F2RL2O00254 374 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 SPINT2O43291 252 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 IGHV3-43DP0DP04 118 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 DTYMKP23919 212 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 TALDO1P37837 337 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 MNDAP41218 407 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 TAS2R20P59543 309 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 TMEM30BQ3MIR4 351 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 Q6ZPA2 131 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 C5orf24Q7Z6I8 188 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 TMEM219Q86XT9 240 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 OR52M1Q8NGK5 317 aa13.72□□□□□ -0.21
VPS52-215ENST00000464425 OR1L1Q8NH94 360 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms