RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 LRRC42Q9Y546 428 aa12.96□□□□□ -0.33
COL1A1-202ENST00000463440 V9GY05 133 aa12.96□□□□□ -0.33
COL1A1-202ENST00000463440 IGHV1-3A0A0C4DH29 117 aa12.95□□□□□ -0.34
COL1A1-202ENST00000463440 PDCD5O14737 125 aa12.95□□□□□ -0.34
COL1A1-202ENST00000463440 REG1BP48304 166 aa12.95□□□□□ -0.34
COL1A1-202ENST00000463440 TMEM95Q3KNT9 176 aa12.95□□□□□ -0.34
COL1A1-202ENST00000463440 STEAP3Q658P3 488 aa12.95□□□□□ -0.34
COL1A1-202ENST00000463440 FAM53AQ6NSI3 398 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-202ENST00000463440 SLC25A48Q6ZT89 311 aaKnown RBP12.95□□□□□ -0.34
COL1A1-202ENST00000463440 ZNF439Q8NDP4 499 aa12.95□□□□□ -0.34
COL1A1-202ENST00000463440 FAM110DQ8TAY7 271 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-202ENST00000463440 LPAR5Q9H1C0 372 aa12.95□□□□□ -0.34
COL1A1-202ENST00000463440 CHMP1AQ9HD42 196 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-202ENST00000463440 TRAV1-2A0A0B4J238 106 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 TRDV1A0A1B0GX56 115 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 TXNL1O43396 289 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 IGKV1D-33P01593 117 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 IGKV1-33P01594 117 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 GALP22466 123 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 MYL9P24844 172 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 HTD2P86397 168 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 HNF4GQ14541 408 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 CT45A1Q5HYN5 189 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 C9orf152Q5JTZ5 239 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 UBE2UQ5VVX9 321 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 CD200R1LQ6Q8B3 271 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 SPARTQ8N0X7 666 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 OR51D1Q8NGF3 324 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 CT45A3Q8NHU0 189 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 WIPF2Q8TF74 440 aaPredicted RBP12.94□□□□□ -0.34
COL1A1-202ENST00000463440 RTN4IP1Q8WWV3 396 aaPredicted RBP12.94□□□□□ -0.34
COL1A1-202ENST00000463440 FCGR1BQ92637 280 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 ST6GALNAC6Q969X2 333 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 FAM3DQ96BQ1 224 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 GALMQ96C23 342 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 CYYR1Q96J86 154 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 RIMS4Q9H426 269 aaPredicted RBP12.94□□□□□ -0.34
COL1A1-202ENST00000463440 ABRACLQ9P1F3 81 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 JPT1Q9UK76 154 aa12.94□□□□□ -0.34
COL1A1-202ENST00000463440 A0A0A6YYD4 124 aa12.93□□□□□ -0.34
COL1A1-202ENST00000463440 SLC31A2O15432 143 aa12.93□□□□□ -0.34
COL1A1-202ENST00000463440 RGS11O94810 467 aa12.93□□□□□ -0.34
COL1A1-202ENST00000463440 AMY1AP04745 511 aa12.93□□□□□ -0.34
COL1A1-202ENST00000463440 AMY2AP04746 511 aa12.93□□□□□ -0.34
COL1A1-202ENST00000463440 CD28P10747 220 aa12.93□□□□□ -0.34
COL1A1-202ENST00000463440 PSMB9P28065 219 aa12.93□□□□□ -0.34
COL1A1-202ENST00000463440 ZNF134P52741 427 aa12.93□□□□□ -0.34
COL1A1-202ENST00000463440 ZNF137PP52743 207 aa12.93□□□□□ -0.34
COL1A1-202ENST00000463440 CLDN12P56749 244 aa12.93□□□□□ -0.34
COL1A1-202ENST00000463440 C2orf76Q3KRA6 126 aa12.93□□□□□ -0.34
COL1A1-202ENST00000463440 MORN2Q502X0 79 aa12.93□□□□□ -0.34
COL1A1-202ENST00000463440 MOB1BQ7L9L4 216 aa12.93□□□□□ -0.34
COL1A1-202ENST00000463440 CENPVQ7Z7K6 275 aaPredicted RBP12.93□□□□□ -0.34
COL1A1-202ENST00000463440 TGIF2LXQ8IUE1 241 aa12.93□□□□□ -0.34
COL1A1-202ENST00000463440 FAM89BQ8N5H3 189 aa12.93□□□□□ -0.34
COL1A1-202ENST00000463440 OR52L2PQ8NGH6 319 aa12.93□□□□□ -0.34
COL1A1-202ENST00000463440 STEAP1Q9UHE8 339 aa12.93□□□□□ -0.34
COL1A1-202ENST00000463440 SH2D7A6NKC9 451 aaPredicted RBP12.92□□□□□ -0.34
COL1A1-202ENST00000463440 SOCS1O15524 211 aa12.92□□□□□ -0.34
COL1A1-202ENST00000463440 FGF16O43320 207 aa12.92□□□□□ -0.34
COL1A1-202ENST00000463440 NAPSAO96009 420 aa12.92□□□□□ -0.34
COL1A1-202ENST00000463440 CD1BP29016 333 aa12.92□□□□□ -0.34
COL1A1-202ENST00000463440 EBI3Q14213 229 aa12.92□□□□□ -0.34
COL1A1-202ENST00000463440 HMGN3Q15651 99 aa12.92□□□□□ -0.34
COL1A1-202ENST00000463440 NSUN5P1Q3KNT7 163 aa12.92□□□□□ -0.34
COL1A1-202ENST00000463440 HES5Q5TA89 166 aa12.92□□□□□ -0.34
COL1A1-202ENST00000463440 HIST2H2BDQ6DRA6 164 aa12.92□□□□□ -0.34
COL1A1-202ENST00000463440 NDUFA11Q86Y39 141 aa12.92□□□□□ -0.34
COL1A1-202ENST00000463440 IZUMO1Q8IYV9 350 aa12.92□□□□□ -0.34
COL1A1-202ENST00000463440 OR5AU1Q8NGC0 362 aa12.92□□□□□ -0.34
COL1A1-202ENST00000463440 OR56B1Q8NGI3 324 aa12.92□□□□□ -0.34
COL1A1-202ENST00000463440 OR2T10Q8NGZ9 312 aa12.92□□□□□ -0.34
COL1A1-202ENST00000463440 SETD6Q8TBK2 473 aa12.92□□□□□ -0.34
COL1A1-202ENST00000463440 HSF4Q9ULV5 492 aa12.92□□□□□ -0.34
COL1A1-202ENST00000463440 RRP15Q9Y3B9 282 aaKnown RBP12.92□□□□□ -0.34
COL1A1-202ENST00000463440 VWFP04275 2813 aa12.91□□□□□ -0.34
COL1A1-202ENST00000463440 TRBV6-6A0A0A6YYG2 114 aa12.91□□□□□ -0.34
COL1A1-202ENST00000463440 IGHV3-72A0A0B4J1Y9 119 aa12.91□□□□□ -0.34
COL1A1-202ENST00000463440 YPEL1O60688 119 aa12.91□□□□□ -0.34
COL1A1-202ENST00000463440 RAB3BP20337 219 aa12.91□□□□□ -0.34
COL1A1-202ENST00000463440 PPP1CCP36873 323 aaKnown RBP12.91□□□□□ -0.34
COL1A1-202ENST00000463440 VEGFCP49767 419 aa12.91□□□□□ -0.34
COL1A1-202ENST00000463440 GNMTQ14749 295 aa12.91□□□□□ -0.34
COL1A1-202ENST00000463440 LY6G6FQ5SQ64 297 aa12.91□□□□□ -0.34
COL1A1-202ENST00000463440 ZNF880Q6PDB4 577 aa12.91□□□□□ -0.34
COL1A1-202ENST00000463440 LYG1Q8N1E2 194 aa12.91□□□□□ -0.34
COL1A1-202ENST00000463440 C5orf56Q8N8D9 126 aa12.91□□□□□ -0.34
COL1A1-202ENST00000463440 EAF1Q96JC9 268 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-202ENST00000463440 YPEL2Q96QA6 119 aa12.91□□□□□ -0.34
COL1A1-202ENST00000463440 CITED2Q99967 270 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-202ENST00000463440 ABHD14AQ9BUJ0 271 aa12.91□□□□□ -0.34
COL1A1-202ENST00000463440 AK3Q9UIJ7 227 aa12.91□□□□□ -0.34
COL1A1-202ENST00000463440 RAB22AQ9UL26 194 aa12.91□□□□□ -0.34
COL1A1-202ENST00000463440 MGAT4AQ9UM21 535 aa12.91□□□□□ -0.34
COL1A1-202ENST00000463440 TMEM272A0A1B0GTI8 110 aa12.9□□□□□ -0.34
COL1A1-202ENST00000463440 IFITM5A6NNB3 132 aa12.9□□□□□ -0.34
COL1A1-202ENST00000463440 LDLRAD4O15165 306 aa12.9□□□□□ -0.34
COL1A1-202ENST00000463440 LANCL1O43813 399 aa12.9□□□□□ -0.34
COL1A1-202ENST00000463440 MOSP00540 346 aa12.9□□□□□ -0.34
COL1A1-202ENST00000463440 OR10A3P58181 314 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms