RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 HDGFL3Q9Y3E1 203 aa0.67□□□□□ -2.3
NDUFA4-202ENST00000463308 PHLDA3Q9Y5J5 127 aa0.67□□□□□ -2.3
NDUFA4-202ENST00000463308 ATP6V1DQ9Y5K8 247 aa0.67□□□□□ -2.3
NDUFA4-202ENST00000463308 LRPPRCP42704 1394 aaKnown RBP0.67□□□□□ -2.3
NDUFA4-202ENST00000463308 MAP3K19Q56UN5 1328 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 MPDZO75970 2070 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 IGKV1OR2-108A0A075B7D4 117 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 IGHV2-26A0A0B4J1V2 119 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 IGSF23A1L1A6 192 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 MYBPHLA2RUH7 354 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 MKRN2OSH3BPM6 223 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 H3BQ85 93 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 K7EPK0 472 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 CCRL2O00421 344 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 MRASO14807 208 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 UBE2L6O14933 153 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 CRXO43186 299 aaPredicted RBP0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 PSCAO43653 123 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 SLC25A20O43772 301 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 STK16O75716 305 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 SOX14O95416 240 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 DEXIO95424 95 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 HBZP02008 142 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 PRB1P04280 392 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 TYMSP04818 313 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 CRYGDP07320 174 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 OR4A8P0C604 315 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 OR13C7P0DN81 318 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 CD36P16671 472 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 CXCL2P19875 107 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 CXCL3P19876 107 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 CSRP1P21291 193 aaKnown RBP0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 GADD45AP24522 165 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 RPS12P25398 132 aaKnown RBP0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 ELK4P28324 431 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 AGTR1P30556 359 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 KCNJ3P48549 501 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 FOXA1P55317 472 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 TCL1AP56279 114 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 MAP3K7CLP57077 242 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 DEFB103AP81534 67 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 HPCAP84074 193 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 SLAMF1Q13291 335 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 SKP2Q13309 424 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 APOFQ13790 326 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 ENDOGQ14249 297 aaKnown RBP0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 PDGFRLQ15198 375 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 RSU1Q15404 277 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 C4orf26Q17RF5 130 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 ZNF181Q2M3W8 571 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 TMEM249Q2WGJ8 235 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 HLA-DRB5Q30154 266 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 MESTQ5EB52 335 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 CLLU1OSQ5K130 101 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 SPATA31B1PQ5VZV4 182 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 FAM45BPQ6NSW5 357 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 CYHR1Q6ZMK1 362 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 PLEKHG7Q6ZR37 379 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 RASSF6Q6ZTQ3 369 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 CLEC20AQ6ZU45 233 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 HIST2H3AQ71DI3 136 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 NAA40Q86UY6 237 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 COMMD7Q86VX2 200 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 CPNE9Q8IYJ1 553 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 HS3ST5Q8IZT8 346 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 TMEM75Q8N9X5 138 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 CCDC112Q8NEF3 446 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 OR51D1Q8NGF3 324 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 OR9I1Q8NGQ6 314 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 OR2Y1Q8NGV0 311 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 OR5P3Q8WZ94 311 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 C12orf43Q96C57 262 aaKnown RBP0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 SMARCD1Q96GM5 515 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 ABHD14BQ96IU4 210 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 TRIB3Q96RU7 358 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 MGLLQ99685 303 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 PRSS27Q9BQR3 290 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 MED18Q9BUE0 208 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 TMEM109Q9BVC6 243 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 TIPINQ9BVW5 301 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 DERL2Q9GZP9 239 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 FGFR1OP2Q9NVK5 253 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 MRPL16Q9NX20 251 aaKnown RBP0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 NKIRAS1Q9NYS0 192 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 OR5V1Q9UGF6 321 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 POLR3HQ9Y535 204 aaPredicted RBP0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 FADS3Q9Y5Q0 445 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 SNX10Q9Y5X0 201 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 PUS1Q9Y606 427 aaKnown RBP eCLIP0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 BRCA1P38398 1863 aaKnown RBP0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 GBF1Q92538 1859 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 TMEM131Q92545 1883 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 PIK3R4Q99570 1358 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 VWDEQ8N2E2 1590 aa0.66□□□□□ -2.3
NDUFA4-202ENST00000463308 ADAMTSL3P82987 1691 aa0.65□□□□□ -2.3
NDUFA4-202ENST00000463308 SDK1Q7Z5N4 2213 aa0.65□□□□□ -2.3
NDUFA4-202ENST00000463308 CRB1P82279 1406 aa0.65□□□□□ -2.3
NDUFA4-202ENST00000463308 A0A0A6YYH2 397 aa0.65□□□□□ -2.31
NDUFA4-202ENST00000463308 IGHV3-43A0A0B4J1X8 118 aa0.65□□□□□ -2.31
NDUFA4-202ENST00000463308 TINCRA0A1B0GVN0 87 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms