RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 C4orf17Q53FE4 359 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 LBHQ53QV2 105 aaPredicted RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 ZNF468Q5VIY5 522 aaPredicted RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 GFI1BQ5VTD9 330 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 ZNF324BQ6AW86 544 aaPredicted RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 ZNF880Q6PDB4 577 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 KCNIP4Q6PIL6 250 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 FIP1L1Q6UN15 594 aaKnown RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 C16orf82Q7Z2V1 217 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 MCEMP1Q8IX19 187 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 ODF3L1Q8IXM7 274 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 TMEM183AQ8IXX5 376 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 Q8IYB0 196 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 FAM58AQ8N1B3 248 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 ZNF709Q8N972 641 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 C1orf162Q8NEQ5 155 aaPredicted RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 OR1P1Q8NH06 330 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 FGFBP3Q8TAT2 258 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 MRPL30Q8TCC3 161 aaKnown RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 RNASEH2CQ8TDP1 164 aaKnown RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 SAP25Q8TEE9 199 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 CA5BP1Q8WTZ4 195 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 IL1F10Q8WWZ1 152 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 NANOS1Q8WY41 292 aaKnown RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 OR5P3Q8WZ94 311 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 LHX4Q969G2 390 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 RAB24Q969Q5 203 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 ACY3Q96HD9 319 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 HIST1H2BLQ99880 126 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 SSX3Q99909 188 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 RSG1Q9BU20 258 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 RTL8AQ9BWD3 113 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 PKIBQ9C010 78 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 ACTR3CQ9C0K3 210 aaPredicted RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 STRADBQ9C0K7 418 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 WDR61Q9GZS3 305 aaKnown RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 OR51I2Q9H344 312 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 RBKSQ9H477 322 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 PRDM13Q9H4Q3 707 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 CDH20Q9HBT6 801 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 TMEM9BQ9NQ34 198 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 RPRMQ9NS64 109 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 ABI3Q9P2A4 366 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 IL36RNQ9UBH0 155 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 B4GALT7Q9UBV7 327 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 PRSS50Q9UI38 385 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 ERRFI1Q9UJM3 462 aaPredicted RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 LAMP3Q9UQV4 416 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 POLR3KQ9Y2Y1 108 aaPredicted RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 MRPS18CQ9Y3D5 142 aaKnown RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 MPC1Q9Y5U8 109 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 U3KQA8 63 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 HEATR5BQ9P2D3 2071 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 LRP4O75096 1905 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 A0A096LPE4 126 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 TRAV24A0A0B4J272 114 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 A0A0G2JRQ6 117 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 CTXND1A0A1B0GTU2 59 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 A0A1W2PPZ6 126 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 ARGFXA6NJG6 315 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 B4E171 279 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 C17orf112F2Z3M2 114 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 HS3ST1O14792 307 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 SYNGR1O43759 233 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 VENTXO95231 258 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 GCGP01275 180 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 IGKV1-5P01602 117 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 IGHV3-9P01782 118 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 GYPAP02724 150 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 SERPINA7P05543 415 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 JMJD7P0C870 316 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 FOSL1P15407 271 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 COX5AP20674 150 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 HOXA6P31267 233 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 OTX2P32243 289 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 NTF4P34130 210 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 IDH3GP51553 393 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-204ENST00000462604 TAS2R60P59551 318 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 PPP1CBP62140 327 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 MEF2BQ02080 365 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-204ENST00000462604 COL10A1Q03692 680 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 TNFRSF9Q07011 255 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 ZFP36L1Q07352 338 aaKnown RBP2.99□□□□□ -1.93
COL8A1-204ENST00000462604 CATR1Q13166 79 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 CLN3Q13286 438 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 DAZAP2Q15038 168 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-204ENST00000462604 JOSD1Q15040 202 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-204ENST00000462604 TESK1Q15569 626 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 COA6Q5JTJ3 125 aaKnown RBP2.99□□□□□ -1.93
COL8A1-204ENST00000462604 SPANXN5Q5MJ07 72 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 WIPI1Q5MNZ9 446 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-204ENST00000462604 C9orf135Q5VTT2 229 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 CDCP2Q5VXM1 449 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 WDR25Q64LD2 544 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-204ENST00000462604 OR8G2PQ6IF36 304 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 CDPF1Q6NVV7 123 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 PCSK4Q6UW60 755 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 PPP1R32Q7Z5V6 425 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-204ENST00000462604 CISD2Q8N5K1 135 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms