RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 CMTM3Q96MX0 182 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 ZNF714Q96N38 554 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 NEU1Q99519 415 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 SULT4A1Q9BR01 284 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 CHCHD6Q9BRQ6 235 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 NICN1Q9BSH3 213 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 BARHL1Q9BZE3 327 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 SELENOIQ9C0D9 397 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 FAM192AQ9GZU8 254 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 CHST6Q9GZX3 395 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 ABCG5Q9H222 651 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 BANF2Q9H503 90 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 VCX3AQ9NNX9 186 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 OR6C3Q9NZP0 311 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 KIF25Q9UIL4 384 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 RAB22AQ9UL26 194 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 SPATA2Q9UM82 520 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 ING4Q9UNL4 249 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 ETV7Q9Y603 341 aa4.64□□□□□ -1.67
VPS36-202ENST00000462289 PLXNB1O43157 2135 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 TRGV10A0A0A0MS01 117 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 IGHV2-26A0A0B4J1V2 119 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 A0A1W2PPH5 198 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 TMEM30CPA0ZSE6 113 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 ZNF701M0R085 212 aaPredicted RBP4.63□□□□□ -1.67
VPS36-202ENST00000462289 ITGB1BP1O14713 200 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 SOCS1O15524 211 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 CRTAPO75718 401 aaPredicted RBP4.63□□□□□ -1.67
VPS36-202ENST00000462289 TPPPO94811 219 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 SLC2A2P11168 524 aaPredicted RBP4.63□□□□□ -1.67
VPS36-202ENST00000462289 GZMHP20718 246 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 GABRR1P24046 479 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 SAA4P35542 130 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 TGFBR1P36897 503 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 MNDAP41218 407 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 TMBIM6P55061 237 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 CLDN12P56749 244 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 RPL15P61313 204 aaKnown RBP4.63□□□□□ -1.67
VPS36-202ENST00000462289 NCS1P62166 190 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 HTD2P86397 168 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 RBM39Q14498 530 aaKnown RBP4.63□□□□□ -1.67
VPS36-202ENST00000462289 ATXN7L3Q14CW9 347 aaPredicted RBP4.63□□□□□ -1.67
VPS36-202ENST00000462289 HMGN3Q15651 99 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 FAM189A2Q15884 450 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 C21orf62-AS1Q17RA5 79 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 MOGAT2Q3SYC2 334 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 KRBOX4Q5JUW0 171 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 MINOS1Q5TGZ0 78 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 GPR157Q5UAW9 335 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 GPR107Q5VW38 600 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 TRAT1Q6PIZ9 186 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 IL17RELQ6ZVW7 336 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 MOB1BQ7L9L4 216 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 C6orf201Q7Z4U5 140 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 RTN4RL2Q86UN3 420 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 BPIFB2Q8N4F0 458 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 TPRX1Q8N7U7 411 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 ZNF565Q8N9K5 539 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 OR4M1Q8NGD0 313 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 OR56B1Q8NGI3 324 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 OR4P4Q8NGL7 312 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 ST6GALNAC6Q969X2 333 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 PCGF1Q9BSM1 259 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 URM1Q9BTM9 101 aaKnown RBP4.63□□□□□ -1.67
VPS36-202ENST00000462289 NAA50Q9GZZ1 169 aaKnown RBP4.63□□□□□ -1.67
VPS36-202ENST00000462289 TMEM133Q9H2Q1 129 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 GAL3ST2Q9H3Q3 398 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 RIMS4Q9H426 269 aaPredicted RBP4.63□□□□□ -1.67
VPS36-202ENST00000462289 HEXA-AS1Q9H8Q6 139 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 ZMAT3Q9HA38 289 aaKnown RBP4.63□□□□□ -1.67
VPS36-202ENST00000462289 PLGRKTQ9HBL7 147 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 SIRT7Q9NRC8 400 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 CALYQ9NYX4 217 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 ABRACLQ9P1F3 81 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 ZNRD1Q9P1U0 126 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 ANAPC10Q9UM13 185 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 TBL2Q9Y4P3 447 aaKnown RBP4.63□□□□□ -1.67
VPS36-202ENST00000462289 PEX16Q9Y5Y5 336 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 POMT1Q9Y6A1 747 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 SESN1Q9Y6P5 492 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 MINOS1-NBL1R4GNA1 71 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 TRRAPQ9Y4A5 3859 aa4.63□□□□□ -1.67
VPS36-202ENST00000462289 WNK1Q9H4A3 2382 aa4.62□□□□□ -1.67
VPS36-202ENST00000462289 VWFP04275 2813 aa4.62□□□□□ -1.67
VPS36-202ENST00000462289 A0A0B4J203 849 aa4.62□□□□□ -1.67
VPS36-202ENST00000462289 hCG_1809904A0A1W2PP81 198 aa4.62□□□□□ -1.67
VPS36-202ENST00000462289 A0A1W2PPE2 198 aa4.62□□□□□ -1.67
VPS36-202ENST00000462289 A0A1W2PR64 198 aa4.62□□□□□ -1.67
VPS36-202ENST00000462289 A0A1W2PRV1 198 aa4.62□□□□□ -1.67
VPS36-202ENST00000462289 FAM90A9PA6NNJ1 464 aa4.62□□□□□ -1.67
VPS36-202ENST00000462289 SERPINE3A8MV23 424 aa4.62□□□□□ -1.67
VPS36-202ENST00000462289 C12orf77C9JDV5 145 aa4.62□□□□□ -1.67
VPS36-202ENST00000462289 MCRIP1C9JLW8 97 aa4.62□□□□□ -1.67
VPS36-202ENST00000462289 NPFFO15130 113 aa4.62□□□□□ -1.67
VPS36-202ENST00000462289 SCGNO76038 276 aa4.62□□□□□ -1.67
VPS36-202ENST00000462289 VENTXO95231 258 aa4.62□□□□□ -1.67
VPS36-202ENST00000462289 SPDEFO95238 335 aa4.62□□□□□ -1.67
VPS36-202ENST00000462289 PAHP00439 452 aa4.62□□□□□ -1.67
VPS36-202ENST00000462289 HIST1H1DP16402 221 aaKnown RBP4.62□□□□□ -1.67
VPS36-202ENST00000462289 RCC1P18754 421 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms