RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 LOXL3P58215 753 aa12.31□□□□□ -0.44
VARS-219ENST00000461328 BLCAPP62952 87 aa12.31□□□□□ -0.44
VARS-219ENST00000461328 HIST2H2BDQ6DRA6 164 aa12.31□□□□□ -0.44
VARS-219ENST00000461328 FAM53AQ6NSI3 398 aaPredicted RBP12.31□□□□□ -0.44
VARS-219ENST00000461328 MOB3BQ86TA1 216 aa12.31□□□□□ -0.44
VARS-219ENST00000461328 CFHR4Q92496 578 aa12.31□□□□□ -0.44
VARS-219ENST00000461328 OCSTAMPQ9BR26 566 aa12.31□□□□□ -0.44
VARS-219ENST00000461328 LPAR5Q9H1C0 372 aa12.31□□□□□ -0.44
VARS-219ENST00000461328 OR2S2Q9NQN1 319 aa12.31□□□□□ -0.44
VARS-219ENST00000461328 MBNL3Q9NUK0 354 aaKnown RBP12.31□□□□□ -0.44
VARS-219ENST00000461328 ABRACLQ9P1F3 81 aa12.31□□□□□ -0.44
VARS-219ENST00000461328 VWFP04275 2813 aa12.31□□□□□ -0.44
VARS-219ENST00000461328 A0A0A6YYD4 124 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 TRAV1-2A0A0B4J238 106 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 SLC31A2O15432 143 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 SOCS1O15524 211 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 FBXO24O75426 580 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 GAPDHP04406 335 aaKnown RBP12.3□□□□□ -0.44
VARS-219ENST00000461328 LPLP06858 475 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 TMEM11P17152 192 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 RAB3BP20337 219 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 VEGFCP49767 419 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 DIAPH2-AS1Q14236 149 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 NEDD8Q15843 81 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 TMEM95Q3KNT9 176 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 Q3ZCU0 254 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 C9orf152Q5JTZ5 239 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 CD200R1LQ6Q8B3 271 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 MOB1BQ7L9L4 216 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 ZNF554Q86TJ5 538 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 LINC00311Q8N616 119 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 RBM14Q96PK6 669 aaKnown RBP12.3□□□□□ -0.44
VARS-219ENST00000461328 MOB4Q9Y3A3 225 aa12.3□□□□□ -0.44
VARS-219ENST00000461328 TMEM272A0A1B0GTI8 110 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 M0QZK8 103 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 GALP22466 123 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 ZNF816Q0VGE8 651 aaPredicted RBP12.29□□□□□ -0.44
VARS-219ENST00000461328 HNF4GQ14541 408 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 GNMTQ14749 295 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 C2orf76Q3KRA6 126 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 KCTD21Q4G0X4 260 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 ABCA11PQ4W5N1 156 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 FBLN7Q53RD9 439 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 Q6ZS46 218 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 C8orf31Q8N9H6 132 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 OR52L2PQ8NGH6 319 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 OR56B1Q8NGI3 324 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 IL1F10Q8WWZ1 152 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 GALMQ96C23 342 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 AK3Q9UIJ7 227 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 JPT1Q9UK76 154 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 STUB1Q9UNE7 303 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 SSR3Q9UNL2 185 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 WNK1Q9H4A3 2382 aa12.29□□□□□ -0.44
VARS-219ENST00000461328 IGHV3-72A0A0B4J1Y9 119 aa12.28□□□□□ -0.44
VARS-219ENST00000461328 IGHV1-3A0A0C4DH29 117 aa12.28□□□□□ -0.44
VARS-219ENST00000461328 SHISA3A0PJX4 238 aa12.28□□□□□ -0.44
VARS-219ENST00000461328 SMIM30A4D0T7 59 aa12.28□□□□□ -0.44
VARS-219ENST00000461328 IFITM5A6NNB3 132 aa12.28□□□□□ -0.44
VARS-219ENST00000461328 RGS11O94810 467 aa12.28□□□□□ -0.44
VARS-219ENST00000461328 IGKV1D-33P01593 117 aa12.28□□□□□ -0.44
VARS-219ENST00000461328 IGKV1-33P01594 117 aa12.28□□□□□ -0.44
VARS-219ENST00000461328 PPP1CCP36873 323 aaKnown RBP12.28□□□□□ -0.44
VARS-219ENST00000461328 MRPS15P82914 257 aaKnown RBP12.28□□□□□ -0.44
VARS-219ENST00000461328 HMGN3Q15651 99 aa12.28□□□□□ -0.44
VARS-219ENST00000461328 SLC25A48Q6ZT89 311 aaKnown RBP12.28□□□□□ -0.44
VARS-219ENST00000461328 THNSL2Q86YJ6 484 aa12.28□□□□□ -0.44
VARS-219ENST00000461328 TGIF2LXQ8IUE1 241 aa12.28□□□□□ -0.44
VARS-219ENST00000461328 LYG1Q8N1E2 194 aa12.28□□□□□ -0.44
VARS-219ENST00000461328 ABHD14AQ9BUJ0 271 aa12.28□□□□□ -0.44
VARS-219ENST00000461328 RIMS4Q9H426 269 aaPredicted RBP12.28□□□□□ -0.44
VARS-219ENST00000461328 C12orf4Q9NQ89 552 aa12.28□□□□□ -0.44
VARS-219ENST00000461328 RAB22AQ9UL26 194 aa12.28□□□□□ -0.44
VARS-219ENST00000461328 SH2D7A6NKC9 451 aaPredicted RBP12.27□□□□□ -0.45
VARS-219ENST00000461328 TXNL1O43396 289 aa12.27□□□□□ -0.45
VARS-219ENST00000461328 NAPSAO96009 420 aa12.27□□□□□ -0.45
VARS-219ENST00000461328 CD28P10747 220 aa12.27□□□□□ -0.45
VARS-219ENST00000461328 NSUN5P1Q3KNT7 163 aa12.27□□□□□ -0.45
VARS-219ENST00000461328 CT45A1Q5HYN5 189 aa12.27□□□□□ -0.45
VARS-219ENST00000461328 C5orf24Q7Z6I8 188 aa12.27□□□□□ -0.45
VARS-219ENST00000461328 FAM89BQ8N5H3 189 aa12.27□□□□□ -0.45
VARS-219ENST00000461328 ZNF439Q8NDP4 499 aa12.27□□□□□ -0.45
VARS-219ENST00000461328 CT45A3Q8NHU0 189 aa12.27□□□□□ -0.45
VARS-219ENST00000461328 RTN4IP1Q8WWV3 396 aaPredicted RBP12.27□□□□□ -0.45
VARS-219ENST00000461328 ARHGAP5-AS1Q96IT6 56 aa12.27□□□□□ -0.45
VARS-219ENST00000461328 CMSS1Q9BQ75 279 aaKnown RBP12.27□□□□□ -0.45
VARS-219ENST00000461328 HDHD3Q9BSH5 251 aaPredicted RBP12.27□□□□□ -0.45
VARS-219ENST00000461328 PECRQ9BY49 303 aa12.27□□□□□ -0.45
VARS-219ENST00000461328 WNT10AQ9GZT5 417 aa12.27□□□□□ -0.45
VARS-219ENST00000461328 TXNL4BQ9NX01 149 aaKnown RBP12.27□□□□□ -0.45
VARS-219ENST00000461328 HSF4Q9ULV5 492 aa12.27□□□□□ -0.45
VARS-219ENST00000461328 A0A0B4J203 849 aa12.26□□□□□ -0.45
VARS-219ENST00000461328 LOC100506127A0A0U1RQW1 187 aa12.26□□□□□ -0.45
VARS-219ENST00000461328 FAM90A9PA6NNJ1 464 aa12.26□□□□□ -0.45
VARS-219ENST00000461328 GADD45AP24522 165 aa12.26□□□□□ -0.45
VARS-219ENST00000461328 HLA-DRB3P79483 266 aa12.26□□□□□ -0.45
VARS-219ENST00000461328 HTD2P86397 168 aa12.26□□□□□ -0.45
VARS-219ENST00000461328 PLA2G7Q13093 441 aa12.26□□□□□ -0.45
VARS-219ENST00000461328 MORN2Q502X0 79 aa12.26□□□□□ -0.45
VARS-219ENST00000461328 STEAP3Q658P3 488 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms