RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 SSTR5P35346 364 aa8.68□□□□□ -1.02
UBR4-208ENST00000459947 ZNF137PP52743 207 aa8.68□□□□□ -1.02
UBR4-208ENST00000459947 C22orf15Q8WYQ4 148 aa8.68□□□□□ -1.02
UBR4-208ENST00000459947 NPFFR1Q9GZQ6 430 aa8.68□□□□□ -1.02
UBR4-208ENST00000459947 OR2S2Q9NQN1 319 aa8.68□□□□□ -1.02
UBR4-208ENST00000459947 LANCL1O43813 399 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 COMPP49747 757 aaPredicted RBP8.67□□□□□ -1.02
UBR4-208ENST00000459947 TMEM50BP56557 158 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 PDZD9Q8IXQ8 264 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.67□□□□□ -1.02
UBR4-208ENST00000459947 TOLLIPQ9H0E2 274 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 CCDC59Q9P031 241 aaKnown RBP8.67□□□□□ -1.02
UBR4-208ENST00000459947 PIPOXQ9P0Z9 390 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 PSG11Q9UQ72 335 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 NSD1Q96L73 2696 aaPredicted RBP8.67□□□□□ -1.02
UBR4-208ENST00000459947 CLEC2LP0C7M8 214 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 ZBTB25P24278 435 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 HACD4Q5VWC8 232 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 SLC25A48Q6ZT89 311 aaKnown RBP8.67□□□□□ -1.02
UBR4-208ENST00000459947 OR4C13Q8NGP0 309 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 GCDHQ92947 438 aaPredicted RBP8.67□□□□□ -1.02
UBR4-208ENST00000459947 BEX1Q9HBH7 125 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 A0A1W2PRD5 423 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 A0A1W2PRF3 423 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 A0A1W2PRM7 423 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 ZNF701M0R085 212 aaPredicted RBP8.67□□□□□ -1.02
UBR4-208ENST00000459947 GPR137BO60478 399 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 SLC22A5O76082 557 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 FAM106CPP0CH98 169 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 CDNFQ49AH0 187 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 CLVS1Q8IUQ0 354 aaPredicted RBP8.67□□□□□ -1.02
UBR4-208ENST00000459947 OR2AK2Q8NG84 335 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 OR8H1Q8NGG4 311 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 CABLES2Q9BTV7 478 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 KCNK15Q9H427 330 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 SLC23A1Q9UHI7 598 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 TCF19Q9Y242 345 aa8.67□□□□□ -1.02
UBR4-208ENST00000459947 C2CD3Q4AC94 2353 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 HSPA12AO43301 675 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 RPS19P39019 145 aaKnown RBP8.66□□□□□ -1.02
UBR4-208ENST00000459947 LOXL3P58215 753 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 C12orf54Q6X4T0 127 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 NR2C2APQ86WQ0 139 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 RFESDQ8TAC1 157 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 S1PR3Q99500 378 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 ABHD14AQ9BUJ0 271 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 SCPEP1Q9HB40 452 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 FABP7O15540 132 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 XRCC3O43542 346 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 FCGR3AP08637 254 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 TAGLNQ01995 201 aaKnown RBP8.66□□□□□ -1.02
UBR4-208ENST00000459947 KRTAP24-1Q3LI83 254 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 OR1L1Q8NH94 360 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 TLN2Q9Y4G6 2542 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 LY6LH3BQJ8 138 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 H3BUX3 64 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 MMP23AO75900 390 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 GDNFP39905 211 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 NCS1P62166 190 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 LSM3P62310 102 aaKnown RBP8.66□□□□□ -1.02
UBR4-208ENST00000459947 PLAC9Q5JTB6 97 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 BRICD5Q6PL45 260 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 IZUMO1Q8IYV9 350 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 BORCS5Q969J3 196 aa8.66□□□□□ -1.02
UBR4-208ENST00000459947 SULT1C2O00338 296 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 IGHV4-59P01825 116 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 EFNB2P52799 333 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 SSX2Q16385 188 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 CTF1Q16619 201 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 MORN2Q502X0 79 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 CNIH2Q6PI25 160 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.65□□□□□ -1.02
UBR4-208ENST00000459947 ZNF439Q8NDP4 499 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 C16orf95Q9H693 158 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 ESM1Q9NQ30 184 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 ZNF581Q9P0T4 197 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 GAB2Q9UQC2 676 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 HSD17B6O14756 317 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 RCC1P18754 421 aaPredicted RBP8.65□□□□□ -1.02
UBR4-208ENST00000459947 OMGP23515 440 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 VBP1P61758 197 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 ZNF260Q3ZCT1 412 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 C1RLQ9NZP8 487 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 ZNF221Q9UK13 617 aa8.65□□□□□ -1.02
UBR4-208ENST00000459947 MDFIC2A0A1B0GVS7 189 aa8.65□□□□□ -1.03
UBR4-208ENST00000459947 A6NDX4 124 aa8.65□□□□□ -1.03
UBR4-208ENST00000459947 CD1BP29016 333 aa8.65□□□□□ -1.03
UBR4-208ENST00000459947 RAG2P55895 527 aa8.65□□□□□ -1.03
UBR4-208ENST00000459947 MRPS10P82664 201 aaKnown RBP8.65□□□□□ -1.03
UBR4-208ENST00000459947 LTC4SQ16873 150 aa8.65□□□□□ -1.03
UBR4-208ENST00000459947 TGIF2LXQ8IUE1 241 aa8.65□□□□□ -1.03
UBR4-208ENST00000459947 SAMD12Q8N8I0 201 aa8.65□□□□□ -1.03
UBR4-208ENST00000459947 TRAV18A0A075B6X5 111 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 RBBP9O75884 186 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 GNG10P50151 68 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 MSMO1Q15800 293 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 SLC25A38Q96DW6 304 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 RNF167Q9H6Y7 350 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 AUNIPQ9H7T9 357 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 OR2F2O95006 317 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms