RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SLC35E4Q6ICL7 350 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 OR2T2Q6IF00 324 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 LILRB2Q8N423 598 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 ZNF645Q8N7E2 425 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 OR13D1Q8NGV5 346 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 OR51H1Q8NH63 302 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 PLPPR1Q8TBJ4 325 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 TMEM171Q8WVE6 324 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 NINJ1Q92982 152 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 GALMQ96C23 342 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 TVP23CQ96ET8 276 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 BSCL2Q96G97 398 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-202ENST00000459727 C12orf57Q99622 126 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 BCL2L14Q9BZR8 327 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 CXXC4Q9H2H0 198 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 TMEM242Q9NWH2 141 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 PSENENQ9NZ42 101 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 CACNG5Q9UF02 275 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 PRSS50Q9UI38 385 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 KCNS2Q9ULS6 477 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 WASF3Q9UPY6 502 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 PI4KAP42356 2102 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 C5orf52A6NGY3 159 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 M0R296 226 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 PPIHO43447 177 aaKnown RBP7.5□□□□□ -1.21
HDAC3-202ENST00000459727 CST7O76096 145 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 ZNF205O95201 554 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 F10P00742 488 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 SRP19P09132 144 aaKnown RBP7.5□□□□□ -1.21
HDAC3-202ENST00000459727 PSG2P11465 335 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 CCL2P13500 99 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 RPL35P42766 123 aaKnown RBP7.5□□□□□ -1.21
HDAC3-202ENST00000459727 ID4P47928 161 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 UBE2KP61086 200 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 HABP2Q14520 560 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-202ENST00000459727 TESK1Q15569 626 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 SMIM21Q3B7S5 101 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 TMEM41BQ5BJD5 291 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 KRBOX4Q5JUW0 171 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 SPSB3Q6PJ21 355 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 RBMS3Q6XE24 437 aaKnown RBP7.5□□□□□ -1.21
HDAC3-202ENST00000459727 ZNF66Q6ZN08 573 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 Q6ZT83 130 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-202ENST00000459727 MRGPRGQ86SM5 289 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 FAM90A1Q86YD7 464 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 FAM169BQ8N8A8 192 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 TMEM105Q8N8V8 129 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 SCCPDHQ8NBX0 429 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 CLDND2Q8NHS1 167 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 PPP1R35Q8TAP8 253 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 MBD3L1Q8WWY6 194 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 IL1F10Q8WWZ1 152 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 TCEAL3Q969E4 200 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 GPR146Q96CH1 333 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 TAAR6Q96RI8 345 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 HES7Q9BYE0 225 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 CTDSP1Q9GZU7 261 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 PARP12Q9H0J9 701 aaKnown RBP7.5□□□□□ -1.21
HDAC3-202ENST00000459727 MAGT1Q9H0U3 335 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 HES4Q9HCC6 221 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 PLA2G3Q9NZ20 509 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 CISD1Q9NZ45 108 aaKnown RBP7.5□□□□□ -1.21
HDAC3-202ENST00000459727 CLCF1Q9UBD9 225 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 FRYLO94915 3013 aa7.5□□□□□ -1.21
HDAC3-202ENST00000459727 LOC102723971A0A1B0GUV8 181 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 ZNF503-AS2A6NEH8 195 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 FAM90A9PA6NNJ1 464 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 H3BQ15 152 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 AQP7O14520 342 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 C1QL1O75973 258 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 HAND1O96004 215 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 OR13C7P0DN81 318 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 BCL2P10415 239 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 COX5AP20674 150 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 KITLGP21583 273 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 EPHA1P21709 976 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 IL2RGP31785 369 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 FHITP49789 147 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 PAX9P55771 341 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 RPP30P78346 268 aaKnown RBP7.49□□□□□ -1.21
HDAC3-202ENST00000459727 ZNF154Q13106 437 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 LRRC75BQ2VPJ9 315 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 AKIRIN2Q53H80 203 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 HES3Q5TGS1 186 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 SP5Q6BEB4 398 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-202ENST00000459727 ZNF787Q6DD87 383 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 CLEC9AQ6UXN8 241 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 FAM214BQ7L5A3 538 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 CENPVQ7Z7K6 275 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-202ENST00000459727 TMEM217Q8N7C4 229 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 EDARADDQ8WWZ3 215 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 WNT2BQ93097 391 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 SARAFQ96BY9 339 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 LURAP1Q96LR2 239 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 HSD17B10Q99714 261 aaKnown RBP7.49□□□□□ -1.21
HDAC3-202ENST00000459727 ZNF251Q9BRH9 671 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 TMEM147Q9BVK8 224 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 C12orf49Q9H741 205 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 IL36RNQ9UBH0 155 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms