RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 HLA-GP17693 338 aa20.25■□□□□ 0.83
U2AF1-204ENST00000459639 LRRC10Q5BKY1 277 aa20.25■□□□□ 0.83
U2AF1-204ENST00000459639 ZNF818PQ6ZRF7 136 aa20.25■□□□□ 0.83
U2AF1-204ENST00000459639 LDLRAD3Q86YD5 345 aa20.25■□□□□ 0.83
U2AF1-204ENST00000459639 OR52L2PQ8NGH6 319 aa20.25■□□□□ 0.83
U2AF1-204ENST00000459639 ASB13Q8WXK3 278 aa20.25■□□□□ 0.83
U2AF1-204ENST00000459639 CORO2AQ92828 525 aa20.25■□□□□ 0.83
U2AF1-204ENST00000459639 OR2A7Q96R45 310 aa20.25■□□□□ 0.83
U2AF1-204ENST00000459639 CCL28Q9NRJ3 127 aa20.25■□□□□ 0.83
U2AF1-204ENST00000459639 CALYQ9NYX4 217 aa20.25■□□□□ 0.83
U2AF1-204ENST00000459639 CTSZQ9UBR2 303 aa20.25■□□□□ 0.83
U2AF1-204ENST00000459639 KCNIP3Q9Y2W7 256 aa20.25■□□□□ 0.83
U2AF1-204ENST00000459639 DBX1A6NMT0 343 aa20.24■□□□□ 0.83
U2AF1-204ENST00000459639 F2RL2O00254 374 aa20.24■□□□□ 0.83
U2AF1-204ENST00000459639 C1QBP02746 253 aa20.24■□□□□ 0.83
U2AF1-204ENST00000459639 MEF2CQ06413 473 aaPredicted RBP20.24■□□□□ 0.83
U2AF1-204ENST00000459639 NLRC3Q7RTR2 1065 aa20.24■□□□□ 0.83
U2AF1-204ENST00000459639 TCF23Q7RTU1 214 aa20.24■□□□□ 0.83
U2AF1-204ENST00000459639 OR5M8Q8NGP6 311 aa20.24■□□□□ 0.83
U2AF1-204ENST00000459639 OR2S2Q9NQN1 319 aa20.24■□□□□ 0.83
U2AF1-204ENST00000459639 JPT1Q9UK76 154 aa20.24■□□□□ 0.83
U2AF1-204ENST00000459639 hADV38S2A0JD32 116 aa20.23■□□□□ 0.83
U2AF1-204ENST00000459639 GNMTQ14749 295 aa20.23■□□□□ 0.83
U2AF1-204ENST00000459639 ANKRD55Q3KP44 614 aa20.23■□□□□ 0.83
U2AF1-204ENST00000459639 LIN54Q6MZP7 749 aa20.23■□□□□ 0.83
U2AF1-204ENST00000459639 CMTM1Q8IZ96 169 aa20.23■□□□□ 0.83
U2AF1-204ENST00000459639 RFESDQ8TAC1 157 aa20.23■□□□□ 0.83
U2AF1-204ENST00000459639 PIPOXQ9P0Z9 390 aa20.23■□□□□ 0.83
U2AF1-204ENST00000459639 LPAR3Q9UBY5 353 aa20.23■□□□□ 0.83
U2AF1-204ENST00000459639 UBR5O95071 2799 aaPredicted RBP20.23■□□□□ 0.83
U2AF1-204ENST00000459639 MYO18BQ8IUG5 2567 aa20.23■□□□□ 0.83
U2AF1-204ENST00000459639 FLNCQ14315 2725 aa20.23■□□□□ 0.83
U2AF1-204ENST00000459639 MEX3AA1L020 520 aaKnown RBP20.22■□□□□ 0.83
U2AF1-204ENST00000459639 ZNF729A6NN14 1252 aaPredicted RBP20.22■□□□□ 0.83
U2AF1-204ENST00000459639 HSD17B6O14756 317 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 FCN3O75636 299 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 H2BFSP57053 126 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 RAP2BP61225 183 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 C17orf58Q2M2W7 97 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 KCTD9Q7L273 389 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 FGFRL1Q8N441 504 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 BVESQ8NE79 360 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 TIMD4Q96H15 378 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 SUCNR1Q9BXA5 334 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 PARP12Q9H0J9 701 aaKnown RBP20.22■□□□□ 0.83
U2AF1-204ENST00000459639 UBE2J1Q9Y385 318 aaPredicted RBP20.22■□□□□ 0.83
U2AF1-204ENST00000459639 LINC00312Q9Y6C7 94 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 KBTBD11-OT1A0A1B0GTJ5 212 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 DVL1O14640 695 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 MPPED1O15442 326 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 S100GP29377 79 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 CDKN1AP38936 164 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 LY6G6FQ5SQ64 297 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 NOXA1Q86UR1 476 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 FAM216AQ8WUB2 273 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 AKR1E2Q96JD6 320 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 CHIAQ9BZP6 476 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 LINC00574Q9H8X3 128 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 CHODLQ9H9P2 273 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 CLN8Q9UBY8 286 aa20.22■□□□□ 0.83
U2AF1-204ENST00000459639 RBM7Q9Y580 266 aaKnown RBP20.22■□□□□ 0.83
U2AF1-204ENST00000459639 LY6HO94772 140 aa20.21■□□□□ 0.83
U2AF1-204ENST00000459639 SIX6O95475 246 aa20.21■□□□□ 0.83
U2AF1-204ENST00000459639 PPP1CCP36873 323 aaKnown RBP20.21■□□□□ 0.83
U2AF1-204ENST00000459639 TMEM30BQ3MIR4 351 aa20.21■□□□□ 0.83
U2AF1-204ENST00000459639 DCAF12L2Q5VW00 463 aa20.21■□□□□ 0.83
U2AF1-204ENST00000459639 RAB1CQ92928 201 aa20.21■□□□□ 0.83
U2AF1-204ENST00000459639 TAS2R3Q9NYW6 316 aa20.21■□□□□ 0.83
U2AF1-204ENST00000459639 RALYQ9UKM9 306 aaKnown RBP20.21■□□□□ 0.83
U2AF1-204ENST00000459639 OR5AC1P0C628 307 aa20.2■□□□□ 0.82
U2AF1-204ENST00000459639 OR8U9P0C7N5 309 aa20.2■□□□□ 0.82
U2AF1-204ENST00000459639 RPL31P62899 125 aaKnown RBP20.2■□□□□ 0.82
U2AF1-204ENST00000459639 TBC1D26Q86UD7 250 aa20.2■□□□□ 0.82
U2AF1-204ENST00000459639 OR8U1Q8NH10 309 aa20.2■□□□□ 0.82
U2AF1-204ENST00000459639 PLEKHF2Q9H8W4 249 aa20.2■□□□□ 0.82
U2AF1-204ENST00000459639 RAB18Q9NP72 206 aa20.2■□□□□ 0.82
U2AF1-204ENST00000459639 IGHV3-43A0A0B4J1X8 118 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 SMLR1H3BR10 107 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 YPEL1O60688 119 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 F12P00748 615 aaPredicted RBP20.19■□□□□ 0.82
U2AF1-204ENST00000459639 IGHV3-43DP0DP04 118 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 LOXL3P58215 753 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 SRSF4Q08170 494 aaKnown RBP20.19■□□□□ 0.82
U2AF1-204ENST00000459639 TMEM187Q14656 261 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 TMEM155Q4W5P6 130 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 OR2T35Q8NGX2 323 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 EDARADDQ8WWZ3 215 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 YPEL2Q96QA6 119 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 RANBP3Q9H6Z4 567 aaPredicted RBP20.19■□□□□ 0.82
U2AF1-204ENST00000459639 C19orf12Q9NSK7 152 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 PRR13Q9NZ81 148 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 GNG12Q9UBI6 72 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 C3orf85A0A1B0GTC6 90 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 OVOL3O00110 214 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 GZMKP49863 264 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 EFNA4P52798 201 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 MSMO1Q15800 293 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 AVPI1Q5T686 147 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 KCNS2Q9ULS6 477 aa20.19■□□□□ 0.82
U2AF1-204ENST00000459639 CCSO14618 274 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms