RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 NXPH3O95157 252 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 TMEM50AO95807 157 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 OR8U9P0C7N5 309 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 ATF4P18848 351 aaPredicted RBP14.05□□□□□ -0.16
CCDC43-202ENST00000457422 CD200P41217 278 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 PRAMEF6Q5VXH4 476 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 WDR82Q6UXN9 313 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 Q6ZS92 163 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 ODF3L1Q8IXM7 274 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 HSD17B11Q8NBQ5 300 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 OR8U1Q8NH10 309 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 GPR146Q96CH1 333 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 SH3BGRL3Q9H299 93 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 LIN7CQ9NUP9 197 aaKnown RBP14.05□□□□□ -0.16
CCDC43-202ENST00000457422 SLC25A15Q9Y619 301 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 A6NLC8 198 aa14.04□□□□□ -0.16
CCDC43-202ENST00000457422 KIAA1324LA8MWY0 1029 aaPredicted RBP14.04□□□□□ -0.16
CCDC43-202ENST00000457422 SNAPINO95295 136 aa14.04□□□□□ -0.16
CCDC43-202ENST00000457422 GCH1P30793 250 aa14.04□□□□□ -0.16
CCDC43-202ENST00000457422 FABP6P51161 128 aa14.04□□□□□ -0.16
CCDC43-202ENST00000457422 TMEM171Q8WVE6 324 aa14.04□□□□□ -0.16
CCDC43-202ENST00000457422 TOLLIPQ9H0E2 274 aa14.04□□□□□ -0.16
CCDC43-202ENST00000457422 KCNIP1Q9NZI2 227 aa14.04□□□□□ -0.16
CCDC43-202ENST00000457422 KCNS2Q9ULS6 477 aa14.04□□□□□ -0.16
CCDC43-202ENST00000457422 TRIM77I1YAP6 450 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 WRBO00258 174 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 TM4SF5O14894 197 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 AGPAT2O15120 278 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 TSPAN15O95858 294 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 IGKV1-39P01597 117 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 IGKV1D-39P04432 117 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 EPHA1P21709 976 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 EIF2S3LQ2VIR3 472 aaKnown RBP14.03□□□□□ -0.16
CCDC43-202ENST00000457422 MIDNQ504T8 468 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 MSL2Q9HCI7 577 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 PPP1R3CQ9UQK1 317 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 IFNL4K9M1U5 179 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 CHST1O43916 411 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 SFTA3P0C7M3 94 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 SNCAP37840 140 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 CEACAM6P40199 344 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 CAMLGP49069 296 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 PAX9P55771 341 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 CLINT1Q14677 625 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 C19orf12Q9NSK7 152 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 UFSP2Q9NUQ7 469 aa14.03□□□□□ -0.16
CCDC43-202ENST00000457422 RBM7Q9Y580 266 aaKnown RBP14.03□□□□□ -0.16
CCDC43-202ENST00000457422 SVILO95425 2214 aa14.02□□□□□ -0.16
CCDC43-202ENST00000457422 OOEPA6NGQ2 149 aa14.02□□□□□ -0.16
CCDC43-202ENST00000457422 K7N7A8 449 aa14.02□□□□□ -0.16
CCDC43-202ENST00000457422 TFF1P04155 84 aa14.02□□□□□ -0.16
CCDC43-202ENST00000457422 CD80P33681 288 aa14.02□□□□□ -0.16
CCDC43-202ENST00000457422 MZT1Q08AG7 82 aa14.02□□□□□ -0.16
CCDC43-202ENST00000457422 ZBTB34Q8NCN2 500 aa14.02□□□□□ -0.16
CCDC43-202ENST00000457422 CLRN3Q8NCR9 226 aa14.02□□□□□ -0.16
CCDC43-202ENST00000457422 OR5C1Q8NGR4 320 aa14.02□□□□□ -0.16
CCDC43-202ENST00000457422 KIAA2026Q5HYC2 2103 aa14.02□□□□□ -0.17
CCDC43-202ENST00000457422 OMGP23515 440 aa14.02□□□□□ -0.17
CCDC43-202ENST00000457422 ZNF616Q08AN1 781 aa14.02□□□□□ -0.17
CCDC43-202ENST00000457422 SMIM21Q3B7S5 101 aa14.02□□□□□ -0.17
CCDC43-202ENST00000457422 ZNF585BQ52M93 769 aa14.02□□□□□ -0.17
CCDC43-202ENST00000457422 DHRS7BQ6IAN0 325 aaPredicted RBP14.02□□□□□ -0.17
CCDC43-202ENST00000457422 DRAM1Q8N682 238 aa14.02□□□□□ -0.17
CCDC43-202ENST00000457422 GALMQ96C23 342 aa14.02□□□□□ -0.17
CCDC43-202ENST00000457422 RAB40CQ96S21 281 aa14.02□□□□□ -0.17
CCDC43-202ENST00000457422 DSPP15924 2871 aaKnown RBP14.01□□□□□ -0.17
CCDC43-202ENST00000457422 RNF212BA8MTL3 300 aa14.01□□□□□ -0.17
CCDC43-202ENST00000457422 C12orf77C9JDV5 145 aa14.01□□□□□ -0.17
CCDC43-202ENST00000457422 ATP6V0CP27449 155 aa14.01□□□□□ -0.17
CCDC43-202ENST00000457422 DYNLT3P51808 116 aa14.01□□□□□ -0.17
CCDC43-202ENST00000457422 PAX5Q02548 391 aa14.01□□□□□ -0.17
CCDC43-202ENST00000457422 Q6ZRM9 215 aa14.01□□□□□ -0.17
CCDC43-202ENST00000457422 ZNF295-AS1Q8N0V1 137 aa14.01□□□□□ -0.17
CCDC43-202ENST00000457422 RPRMLQ8N4K4 120 aa14.01□□□□□ -0.17
CCDC43-202ENST00000457422 ZNF645Q8N7E2 425 aa14.01□□□□□ -0.17
CCDC43-202ENST00000457422 OR1L1Q8NH94 360 aa14.01□□□□□ -0.17
CCDC43-202ENST00000457422 COQ2Q96H96 371 aa14.01□□□□□ -0.17
CCDC43-202ENST00000457422 SCRT1Q9BWW7 348 aa14.01□□□□□ -0.17
CCDC43-202ENST00000457422 FAM215AQ9Y5M1 114 aa14.01□□□□□ -0.17
CCDC43-202ENST00000457422 HEATR1Q9H583 2144 aaKnown RBP14.01□□□□□ -0.17
CCDC43-202ENST00000457422 UMAD1C9J7I0 102 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 C9JQL5 133 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 C1QL1O75973 258 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 IGKV1-5P01602 117 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 PRH1P02810 166 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 H2AFB1P0C5Y9 115 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 OR3A1P47881 315 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 FHITP49789 147 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 MSMO1Q15800 293 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 IZUMO4Q1ZYL8 232 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 TMEM182Q6ZP80 229 aaPredicted RBP14□□□□□ -0.17
CCDC43-202ENST00000457422 RNASE11Q8TAA1 199 aaKnown RBP14□□□□□ -0.17
CCDC43-202ENST00000457422 WSB1Q9Y6I7 421 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 CHD3Q12873 2000 aaKnown RBP14□□□□□ -0.17
CCDC43-202ENST00000457422 K7EM74 188 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 PTBP3O95758 552 aaKnown RBP14□□□□□ -0.17
CCDC43-202ENST00000457422 F12P00748 615 aaPredicted RBP14□□□□□ -0.17
CCDC43-202ENST00000457422 RPL23AP62750 156 aaKnown RBP14□□□□□ -0.17
CCDC43-202ENST00000457422 AESQ08117 197 aa14□□□□□ -0.17
CCDC43-202ENST00000457422 C3orf36Q3SXR2 165 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms