RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 CDNFQ49AH0 187 aa22.6■■□□□ 1.21
SMARCC1-203ENST00000454240 LINC00311Q8N616 119 aa22.6■■□□□ 1.21
SMARCC1-203ENST00000454240 PIFOQ8TCI5 191 aa22.6■■□□□ 1.21
SMARCC1-203ENST00000454240 OR2S2Q9NQN1 319 aa22.6■■□□□ 1.21
SMARCC1-203ENST00000454240 GNG12Q9UBI6 72 aa22.6■■□□□ 1.21
SMARCC1-203ENST00000454240 H3BUX3 64 aa22.59■■□□□ 1.21
SMARCC1-203ENST00000454240 CEACAM3P40198 252 aa22.59■■□□□ 1.21
SMARCC1-203ENST00000454240 RORCP51449 518 aa22.59■■□□□ 1.21
SMARCC1-203ENST00000454240 MRPS15P82914 257 aaKnown RBP22.59■■□□□ 1.21
SMARCC1-203ENST00000454240 ZNF260Q3ZCT1 412 aa22.59■■□□□ 1.21
SMARCC1-203ENST00000454240 ABCG5Q9H222 651 aa22.59■■□□□ 1.21
SMARCC1-203ENST00000454240 JPT1Q9UK76 154 aa22.59■■□□□ 1.21
SMARCC1-203ENST00000454240 ELF5Q9UKW6 265 aaPredicted RBP22.59■■□□□ 1.21
SMARCC1-203ENST00000454240 AMMECR1Q9Y4X0 333 aaPredicted RBP22.59■■□□□ 1.21
SMARCC1-203ENST00000454240 COL6A5A8TX70 2615 aa22.59■■□□□ 1.21
SMARCC1-203ENST00000454240 A0A0A6YYH2 397 aa22.58■■□□□ 1.21
SMARCC1-203ENST00000454240 A0A1W2PPE3 182 aa22.58■■□□□ 1.21
SMARCC1-203ENST00000454240 BTBD17A6NE02 478 aa22.58■■□□□ 1.21
SMARCC1-203ENST00000454240 A6NJ64 397 aa22.58■■□□□ 1.21
SMARCC1-203ENST00000454240 GSTP1P09211 210 aaKnown RBP22.58■■□□□ 1.21
SMARCC1-203ENST00000454240 DYNLT3P51808 116 aa22.58■■□□□ 1.21
SMARCC1-203ENST00000454240 TMBIM6P55061 237 aa22.58■■□□□ 1.21
SMARCC1-203ENST00000454240 MORN2Q502X0 79 aa22.58■■□□□ 1.21
SMARCC1-203ENST00000454240 TPTE2P1Q5T6R2 138 aa22.58■■□□□ 1.21
SMARCC1-203ENST00000454240 ZNF439Q8NDP4 499 aa22.58■■□□□ 1.21
SMARCC1-203ENST00000454240 OR52L2PQ8NGH6 319 aa22.58■■□□□ 1.21
SMARCC1-203ENST00000454240 RAB2BQ8WUD1 216 aa22.58■■□□□ 1.21
SMARCC1-203ENST00000454240 BCL7BQ9BQE9 202 aa22.58■■□□□ 1.21
SMARCC1-203ENST00000454240 VPREB3Q9UKI3 123 aa22.58■■□□□ 1.21
SMARCC1-203ENST00000454240 FCGR3AP08637 254 aa22.57■■□□□ 1.2
SMARCC1-203ENST00000454240 HLA-DRB3P79483 266 aa22.57■■□□□ 1.2
SMARCC1-203ENST00000454240 ARFRP1Q13795 201 aa22.57■■□□□ 1.2
SMARCC1-203ENST00000454240 PLA1AQ53H76 456 aa22.57■■□□□ 1.2
SMARCC1-203ENST00000454240 HACD4Q5VWC8 232 aa22.57■■□□□ 1.2
SMARCC1-203ENST00000454240 OR10V1Q8NGI7 309 aa22.57■■□□□ 1.2
SMARCC1-203ENST00000454240 PHF21AQ96BD5 680 aa22.57■■□□□ 1.2
SMARCC1-203ENST00000454240 OCSTAMPQ9BR26 566 aa22.57■■□□□ 1.2
SMARCC1-203ENST00000454240 OOSP1A8MZH6 123 aa22.56■■□□□ 1.2
SMARCC1-203ENST00000454240 YPEL1O60688 119 aa22.56■■□□□ 1.2
SMARCC1-203ENST00000454240 RAB13P51153 203 aa22.56■■□□□ 1.2
SMARCC1-203ENST00000454240 ZNF134P52741 427 aa22.56■■□□□ 1.2
SMARCC1-203ENST00000454240 GNMTQ14749 295 aa22.56■■□□□ 1.2
SMARCC1-203ENST00000454240 CT45A1Q5HYN5 189 aa22.56■■□□□ 1.2
SMARCC1-203ENST00000454240 UBE2NLQ5JXB2 153 aa22.56■■□□□ 1.2
SMARCC1-203ENST00000454240 LY6G6FQ5SQ64 297 aa22.56■■□□□ 1.2
SMARCC1-203ENST00000454240 STEAP3Q658P3 488 aa22.56■■□□□ 1.2
SMARCC1-203ENST00000454240 SLC25A48Q6ZT89 311 aaKnown RBP22.56■■□□□ 1.2
SMARCC1-203ENST00000454240 OR10X1Q8NGY0 326 aa22.56■■□□□ 1.2
SMARCC1-203ENST00000454240 CT45A3Q8NHU0 189 aa22.56■■□□□ 1.2
SMARCC1-203ENST00000454240 YPEL2Q96QA6 119 aa22.56■■□□□ 1.2
SMARCC1-203ENST00000454240 FAM181BA6NEQ2 426 aa22.55■■□□□ 1.2
SMARCC1-203ENST00000454240 TRDCB7Z8K6 153 aa22.55■■□□□ 1.2
SMARCC1-203ENST00000454240 SLC31A2O15432 143 aa22.55■■□□□ 1.2
SMARCC1-203ENST00000454240 GPR137BO60478 399 aa22.55■■□□□ 1.2
SMARCC1-203ENST00000454240 SCTP09683 121 aa22.55■■□□□ 1.2
SMARCC1-203ENST00000454240 MADCAM1Q13477 382 aa22.55■■□□□ 1.2
SMARCC1-203ENST00000454240 SRSF7Q16629 238 aaKnown RBP eCLIP22.55■■□□□ 1.23e-6■□□□□ 8.2
SMARCC1-203ENST00000454240 PNLIPRP3Q17RR3 467 aa22.55■■□□□ 1.2
SMARCC1-203ENST00000454240 SAMD12Q8N8I0 201 aa22.55■■□□□ 1.2
SMARCC1-203ENST00000454240 IL1F10Q8WWZ1 152 aa22.55■■□□□ 1.2
SMARCC1-203ENST00000454240 ACOT12Q8WYK0 555 aa22.55■■□□□ 1.2
SMARCC1-203ENST00000454240 DIABLOQ9NR28 239 aa22.55■■□□□ 1.2
SMARCC1-203ENST00000454240 TMEM235A6NFC5 223 aa22.54■■□□□ 1.2
SMARCC1-203ENST00000454240 PPP1CCP36873 323 aaKnown RBP22.54■■□□□ 1.2
SMARCC1-203ENST00000454240 TALDO1P37837 337 aa22.54■■□□□ 1.2
SMARCC1-203ENST00000454240 RPL15P61313 204 aaKnown RBP22.54■■□□□ 1.2
SMARCC1-203ENST00000454240 SPCS2Q15005 226 aa22.54■■□□□ 1.2
SMARCC1-203ENST00000454240 S100A16Q96FQ6 103 aaKnown RBP22.54■■□□□ 1.2
SMARCC1-203ENST00000454240 ABCB10Q9NRK6 738 aa22.54■■□□□ 1.2
SMARCC1-203ENST00000454240 ZNF230Q9UIE0 474 aaPredicted RBP22.54■■□□□ 1.2
SMARCC1-203ENST00000454240 TRAV18A0A075B6X5 111 aa22.53■■□□□ 1.2
SMARCC1-203ENST00000454240 TMEM89A2RUT3 159 aa22.53■■□□□ 1.2
SMARCC1-203ENST00000454240 RGS11O94810 467 aa22.53■■□□□ 1.2
SMARCC1-203ENST00000454240 HKR1P10072 659 aa22.53■■□□□ 1.2
SMARCC1-203ENST00000454240 ZNF182P17025 639 aaPredicted RBP22.53■■□□□ 1.2
SMARCC1-203ENST00000454240 DTYMKP23919 212 aa22.53■■□□□ 1.2
SMARCC1-203ENST00000454240 ACTG1P63261 375 aa22.53■■□□□ 1.2
SMARCC1-203ENST00000454240 PITPNAQ00169 270 aa22.53■■□□□ 1.2
SMARCC1-203ENST00000454240 Q6ZS49 121 aa22.53■■□□□ 1.2
SMARCC1-203ENST00000454240 RPEQ96AT9 228 aa22.53■■□□□ 1.2
SMARCC1-203ENST00000454240 CMTM3Q96MX0 182 aa22.53■■□□□ 1.2
SMARCC1-203ENST00000454240 COMMD3Q9UBI1 195 aa22.53■■□□□ 1.2
SMARCC1-203ENST00000454240 XRCC3O43542 346 aa22.52■■□□□ 1.2
SMARCC1-203ENST00000454240 DIAPH2-AS1Q14236 149 aa22.52■■□□□ 1.2
SMARCC1-203ENST00000454240 LY6EQ16553 131 aa22.52■■□□□ 1.2
SMARCC1-203ENST00000454240 CCDC144NLQ6NUI1 221 aa22.52■■□□□ 1.2
SMARCC1-203ENST00000454240 TOMM40LQ969M1 308 aa22.52■■□□□ 1.2
SMARCC1-203ENST00000454240 ST6GALNAC6Q969X2 333 aa22.52■■□□□ 1.2
SMARCC1-203ENST00000454240 IGKV1-6A0A0C4DH72 117 aa22.51■■□□□ 1.19
SMARCC1-203ENST00000454240 KIR2DS4P43632 304 aa22.51■■□□□ 1.19
SMARCC1-203ENST00000454240 ARHGDIBP52566 201 aa22.51■■□□□ 1.19
SMARCC1-203ENST00000454240 ZNF137PP52743 207 aa22.51■■□□□ 1.19
SMARCC1-203ENST00000454240 KIR2DS1Q14954 304 aa22.51■■□□□ 1.19
SMARCC1-203ENST00000454240 IZUMO1Q8IYV9 350 aa22.51■■□□□ 1.19
SMARCC1-203ENST00000454240 OR4A4PQ8NGN8 299 aa22.51■■□□□ 1.19
SMARCC1-203ENST00000454240 NUDCD2Q8WVJ2 157 aa22.51■■□□□ 1.19
SMARCC1-203ENST00000454240 MAFIPQ8WZ33 124 aa22.51■■□□□ 1.19
SMARCC1-203ENST00000454240 TCF19Q9Y242 345 aa22.51■■□□□ 1.19
SMARCC1-203ENST00000454240 CEPT1Q9Y6K0 416 aa22.51■■□□□ 1.19
SMARCC1-203ENST00000454240 FABP7O15540 132 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms