RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 PYCR3Q53H96 274 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 TMEM255AQ5JRV8 349 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 STRADAQ7RTN6 431 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 HSD17B13Q7Z5P4 300 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 GALNT10Q86SR1 603 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 CEND1Q8N111 149 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 MUC15Q8N387 334 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 SLC35G3Q8N808 338 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 SLC26A10Q8NG04 563 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 OR13G1Q8NGZ3 307 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 UCN3Q969E3 161 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 IL22RA2Q969J5 263 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 CLDN23Q96B33 292 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 TAMM41Q96BW9 452 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 BTF3L4Q96K17 158 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 QKIQ96PU8 341 aaKnown RBP eCLIP2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 OR2V2Q96R30 315 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 PHB2Q99623 299 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 TIPINQ9BVW5 301 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 BOLA2Q9H3K6 86 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 C11orf49Q9H6J7 331 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 VSIRQ9H7M9 311 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 XPNPEP1Q9NQW7 623 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 BATF3Q9NR55 127 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 UBQLN4Q9NRR5 601 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 MARCH5Q9NX47 278 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 ZNF226Q9NYT6 803 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 SIGLEC7Q9Y286 467 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 ATAD5Q96QE3 1844 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 ZNF236Q9UL36 1845 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 TPRP12270 2363 aaKnown RBP2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 ACACBO00763 2458 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 ROCK2O75116 1388 aaKnown RBP2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 BRWD1Q9NSI6 2320 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 FASNP49327 2511 aaKnown RBP2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 NCOR2Q9Y618 2525 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 DOCK1Q14185 1865 aa2.69□□□□□ -1.98
HMGB1P15-201ENST00000453854 GPR179Q6PRD1 2367 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 MYH13Q9UKX3 1938 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 CCL15-CCL14A0A0B4J2E2 113 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 FUOMA2VDF0 154 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 PGPA6NDG6 321 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 RBFOX3A6NFN3 312 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 ZFP92A6NM28 416 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 MFNGO00587 321 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 NOS1APO75052 506 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 NPIPB7O75200 414 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 PDCD6O75340 191 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 TRBV12-3P01733 135 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 IGKV5-2P06315 115 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 LINC00614P0C842 121 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 APLNRP35414 380 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 CDKN2BP42772 138 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 OR3A4PP47883 348 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 NDUFA8P51970 172 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 NCBP2P52298 156 aaKnown RBP eCLIP2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 ZNF138P52744 262 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 SLC18A1P54219 525 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 RWDD2BP57060 319 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 TMEM33P57088 247 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 TAS2R43P59537 309 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 SPCS3P61009 180 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 NAA20P61599 178 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 GTF2BQ00403 316 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 IFITM3Q01628 133 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 TNFRSF9Q07011 255 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 SMAGPQ0VAQ4 97 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 PPP1R1AQ13522 171 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 PAFAH1B3Q15102 231 aaKnown RBP2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 EBPQ15125 230 aaKnown RBP2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 SHHQ15465 462 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 ZNF239Q16600 458 aaKnown RBP2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 CCL15Q16663 113 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 LIN52Q52LA3 116 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 FAM71E1Q6IPT2 247 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 C3orf33Q6P1S2 294 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 RASSF6Q6ZTQ3 369 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 LINC00173Q6ZV60 143 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 COMMD7Q86VX2 200 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 C1orf158Q8N1D5 194 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 ARIH2OSQ8N7S6 290 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 TMEM161BQ8NDZ6 487 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 ACTRT1Q8TDG2 376 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 C7orf33Q8WU49 177 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 MARC2Q969Z3 335 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 PLEKHF1Q96S99 279 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 SLC25A2Q9BXI2 301 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 PECRQ9BY49 303 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 CLMPQ9H6B4 373 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 METTL17Q9H7H0 456 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 NMNAT1Q9HAN9 279 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 EDA2RQ9HAV5 297 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 C12orf10Q9HB07 376 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 CCL28Q9NRJ3 127 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 DMAC2Q9NW81 257 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 TAS2R5Q9NYW4 299 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 HHLA2Q9UM44 414 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 NEUROG3Q9Y4Z2 214 aa2.68□□□□□ -1.98
HMGB1P15-201ENST00000453854 WSB1Q9Y6I7 421 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms