RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 TUSC1Q2TAM9 212 aa11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 HLA-DRB5Q30154 266 aa11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 MORN2Q502X0 79 aa11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 STEAP3Q658P3 488 aa11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 Q6ZPA2 131 aa11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 C5orf24Q7Z6I8 188 aa11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 LHFPL4Q7Z7J7 247 aa11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 OR52L2PQ8NGH6 319 aa11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 OR10V1Q8NGI7 309 aa11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 OR4A4PQ8NGN8 299 aa11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 NUDCD2Q8WVJ2 157 aa11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 YPEL2Q96QA6 119 aa11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 MEGF9Q9H1U4 602 aa11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 MMP28Q9H239 520 aa11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 DPAGT1Q9H3H5 408 aa11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 DPM3Q9P2X0 92 aa11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 ZNF230Q9UIE0 474 aaPredicted RBP11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 MRPS7Q9Y2R9 242 aaKnown RBP11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 CSPG4Q6UVK1 2322 aa11.86□□□□□ -0.51
NCKIPSD-207ENST00000453349 CTDSP2O14595 271 aa11.85□□□□□ -0.51
NCKIPSD-207ENST00000453349 HSPA12AO43301 675 aa11.85□□□□□ -0.51
NCKIPSD-207ENST00000453349 CBX5P45973 191 aa11.85□□□□□ -0.51
NCKIPSD-207ENST00000453349 HILS1P60008 231 aa11.85□□□□□ -0.51
NCKIPSD-207ENST00000453349 SSX2Q16385 188 aa11.85□□□□□ -0.51
NCKIPSD-207ENST00000453349 PRIMA1Q86XR5 153 aa11.85□□□□□ -0.51
NCKIPSD-207ENST00000453349 C8orf31Q8N9H6 132 aa11.85□□□□□ -0.51
NCKIPSD-207ENST00000453349 OR4P4Q8NGL7 312 aa11.85□□□□□ -0.51
NCKIPSD-207ENST00000453349 OR10X1Q8NGY0 326 aa11.85□□□□□ -0.51
NCKIPSD-207ENST00000453349 HILPDAQ9Y5L2 63 aa11.85□□□□□ -0.51
NCKIPSD-207ENST00000453349 A0A1W2PPE3 182 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 BTBD17A6NE02 478 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 TRIM77I1YAP6 450 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 FABP7O15540 132 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 HOXA3O43365 443 aaPredicted RBP11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 GSTT2P0CG29 244 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 GSTT2BP0CG30 244 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 PRSS3P35030 304 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 CEACAM6P40199 344 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 IER3P46695 156 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 ARHGDIBP52566 201 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 LY6G6FQ5SQ64 297 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 UTF1Q5T230 341 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 Q6ZS49 121 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 LDLRAD3Q86YD5 345 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 LINC00311Q8N616 119 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 MCFD2Q8NI22 146 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 C17orf50Q8WW18 174 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 MAFIPQ8WZ33 124 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 AJUBAQ96IF1 538 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 OCSTAMPQ9BR26 566 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 DCUN1D5Q9BTE7 237 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 SLIRPQ9GZT3 109 aaKnown RBP11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 C6orf62Q9GZU0 229 aaPredicted RBP11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 ZNRD1Q9P1U0 126 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 EXTL2Q9UBQ6 330 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 SLC23A1Q9UHI7 598 aa11.84□□□□□ -0.51
NCKIPSD-207ENST00000453349 SSX5O60225 188 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 VENTXO95231 258 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 HLA-DQB1P01920 261 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 CTXN2P0C2S0 81 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 PTHLHP12272 177 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 IL3RAP26951 378 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 PPP1CCP36873 323 aaKnown RBP11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 MADCAM1Q13477 382 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 GNMTQ14749 295 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 CT45A1Q5HYN5 189 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 FAM53AQ6NSI3 398 aaPredicted RBP11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 SLC25A48Q6ZT89 311 aaKnown RBP11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 OR10J5Q8NHC4 309 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 CT45A3Q8NHU0 189 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 C15orf40Q8WUR7 153 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 SSMEM1Q8WWF3 244 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 RPEQ96AT9 228 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 SSX3Q99909 188 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 IFT46Q9NQC8 304 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 ABCB10Q9NRK6 738 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 TNFRSF19Q9NS68 423 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 POMT1Q9Y6A1 747 aa11.83□□□□□ -0.52
NCKIPSD-207ENST00000453349 DNAJC9-AS1A6NH13 148 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 OOSP1A8MZH6 123 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 LY6LH3BQJ8 138 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 BET1O15155 118 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 TPPPO94811 219 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 DIRAS3O95661 229 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 LPLP06858 475 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 ZNF134P52741 427 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 SLC9A3R2Q15599 337 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 AANATQ16613 207 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 LRRC75BQ2VPJ9 315 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 LDLRAD2Q5SZI1 272 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 TPTE2P1Q5T6R2 138 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 CCDC144NLQ6NUI1 221 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 HOGA1Q86XE5 327 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 SNX29P2Q8IUI4 249 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 LAX1Q8IWV1 398 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 DYNAPQ8N1N2 210 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 TMEM86BQ8N661 226 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 ZDHHC22Q8N966 263 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 ZNF439Q8NDP4 499 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 OR2AK2Q8NG84 335 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms