RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 LINC00574Q9H8X3 128 aa4.96□□□□□ -1.62
SDC4P-201ENST00000453285 CHODLQ9H9P2 273 aa4.96□□□□□ -1.62
SDC4P-201ENST00000453285 GPN1Q9HCN4 374 aaPredicted RBP4.96□□□□□ -1.62
SDC4P-201ENST00000453285 CCL28Q9NRJ3 127 aa4.96□□□□□ -1.62
SDC4P-201ENST00000453285 C19orf12Q9NSK7 152 aa4.96□□□□□ -1.62
SDC4P-201ENST00000453285 RDH8Q9NYR8 311 aa4.96□□□□□ -1.62
SDC4P-201ENST00000453285 KCNIP1Q9NZI2 227 aa4.96□□□□□ -1.62
SDC4P-201ENST00000453285 OR6C3Q9NZP0 311 aa4.96□□□□□ -1.62
SDC4P-201ENST00000453285 SLC25A10Q9UBX3 287 aaPredicted RBP4.96□□□□□ -1.62
SDC4P-201ENST00000453285 OR2W1Q9Y3N9 320 aa4.96□□□□□ -1.62
SDC4P-201ENST00000453285 CENPEQ02224 2701 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 CELSR2Q9HCU4 2923 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 TNCP24821 2201 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 IGHV3-43A0A0B4J1X8 118 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 KBTBD11-OT1A0A1B0GTJ5 212 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 FAM172BPA6NC97 362 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 CRYM-AS1A6NIL9 109 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 ZNF729A6NN14 1252 aaPredicted RBP4.95□□□□□ -1.62
SDC4P-201ENST00000453285 A8MV72 311 aaPredicted RBP4.95□□□□□ -1.62
SDC4P-201ENST00000453285 F5H0A9 414 aaPredicted RBP4.95□□□□□ -1.62
SDC4P-201ENST00000453285 HAX1O00165 279 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 PPIHO43447 177 aaKnown RBP4.95□□□□□ -1.62
SDC4P-201ENST00000453285 NDUFB3O43676 98 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 CREBL2O60519 120 aaPredicted RBP4.95□□□□□ -1.62
SDC4P-201ENST00000453285 YPEL1O60688 119 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 MMP23AO75900 390 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 CCNKO75909 580 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 SFT2D2O95562 160 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 DUS4LO95620 317 aaKnown RBP4.95□□□□□ -1.62
SDC4P-201ENST00000453285 IGHV4-39P01824 125 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 IGHV3-43DP0DP04 118 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 AKR1C4P17516 323 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 NDUFB7P17568 137 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 IL2RGP31785 369 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 DLX6P56179 175 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 TAS2R31P59538 309 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 HERV-K104P61576 105 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 RND3P61587 244 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 ZNF273Q14593 569 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 MORN2Q502X0 79 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 C4orf46Q504U0 113 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 LRRC10Q5BKY1 277 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 UTF1Q5T230 341 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 TMEM200BQ69YZ2 307 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 LPCAT3Q6P1A2 487 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 ZNF818PQ6ZRF7 136 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 AKAP14Q86UN6 197 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 SLC38A6Q8IZM9 456 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 PRR18Q8N4B5 295 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 C12orf45Q8N5I9 185 aaPredicted RBP4.95□□□□□ -1.62
SDC4P-201ENST00000453285 SPICQ8N5J4 248 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 C11orf42Q8N5U0 333 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 ZNF565Q8N9K5 539 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 OR2AK2Q8NG84 335 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 OR10V1Q8NGI7 309 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 MITD1Q8WV92 249 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 RAB1CQ92928 201 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 TOMM40LQ969M1 308 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 PPP1R14BQ96C90 147 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 WDR89Q96FK6 387 aaPredicted RBP4.95□□□□□ -1.62
SDC4P-201ENST00000453285 ZNF486Q96H40 463 aaPredicted RBP4.95□□□□□ -1.62
SDC4P-201ENST00000453285 YPEL2Q96QA6 119 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 SLC5A7Q9GZV3 580 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 PATZ1Q9HBE1 687 aaKnown RBP4.95□□□□□ -1.62
SDC4P-201ENST00000453285 TAS2R3Q9NYW6 316 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 CALYQ9NYX4 217 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 CLN8Q9UBY8 286 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 ZNF69Q9UC07 566 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 C14orf166Q9Y224 244 aaKnown RBP4.95□□□□□ -1.62
SDC4P-201ENST00000453285 UBE2J1Q9Y385 318 aaPredicted RBP4.95□□□□□ -1.62
SDC4P-201ENST00000453285 LINC00312Q9Y6C7 94 aa4.95□□□□□ -1.62
SDC4P-201ENST00000453285 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.95□□□□□ -1.62
SDC4P-201ENST00000453285 FBN2P35556 2912 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 ABCA12Q86UK0 2595 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 TRGV10A0A0A0MS01 117 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 A0A0B4J2A0 478 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 hADV38S2A0JD32 116 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 DBX1A6NMT0 343 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 GPR31O00270 319 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 ITGB1BP1O14713 200 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 HSD17B6O14756 317 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 MPPED1O15442 326 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 SPINT2O43291 252 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 HSPA12AO43301 675 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 SSNA1O43805 119 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 PROP1O75360 226 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 PGLYRP1O75594 196 aaPredicted RBP4.94□□□□□ -1.62
SDC4P-201ENST00000453285 OR2A4O95047 310 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 HLA-AP01891 365 aaKnown RBP4.94□□□□□ -1.62
SDC4P-201ENST00000453285 OR8U9P0C7N5 309 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 PAX1P15863 534 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 CCL3L1P16619 93 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 HLA-GP17693 338 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 OMGP23515 440 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 PPP1CCP36873 323 aaKnown RBP4.94□□□□□ -1.62
SDC4P-201ENST00000453285 LUMP51884 338 aaPredicted RBP4.94□□□□□ -1.62
SDC4P-201ENST00000453285 ZNF134P52741 427 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 PIGPP57054 158 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 ERVFRD-1P60508 538 aa4.94□□□□□ -1.62
SDC4P-201ENST00000453285 RPL31P62899 125 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms