RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 SPIN2AQ99865 258 aa17.08■□□□□ 0.33
PDCD2-204ENST00000453163 SPIN2BQ9BPZ2 258 aa17.08■□□□□ 0.33
PDCD2-204ENST00000453163 IGHV1-18A0A0C4DH31 117 aa17.08■□□□□ 0.32
PDCD2-204ENST00000453163 TIMM8AO60220 97 aaPredicted RBP17.08■□□□□ 0.32
PDCD2-204ENST00000453163 HAND1O96004 215 aa17.08■□□□□ 0.32
PDCD2-204ENST00000453163 IGLV1-44P01699 117 aa17.08■□□□□ 0.32
PDCD2-204ENST00000453163 ID4P47928 161 aa17.08■□□□□ 0.32
PDCD2-204ENST00000453163 CXorf66Q5JRM2 361 aaPredicted RBP17.08■□□□□ 0.32
PDCD2-204ENST00000453163 RBMS3Q6XE24 437 aaKnown RBP17.08■□□□□ 0.32
PDCD2-204ENST00000453163 Q6ZR03 302 aa17.08■□□□□ 0.32
PDCD2-204ENST00000453163 C11orf53Q8IXP5 236 aa17.08■□□□□ 0.32
PDCD2-204ENST00000453163 OR10V1Q8NGI7 309 aa17.08■□□□□ 0.32
PDCD2-204ENST00000453163 ZNF251Q9BRH9 671 aa17.08■□□□□ 0.32
PDCD2-204ENST00000453163 MAGT1Q9H0U3 335 aa17.08■□□□□ 0.32
PDCD2-204ENST00000453163 C11orf1Q9H5F2 150 aa17.08■□□□□ 0.32
PDCD2-204ENST00000453163 MSL2Q9HCI7 577 aa17.08■□□□□ 0.32
PDCD2-204ENST00000453163 CHD3Q12873 2000 aaKnown RBP17.08■□□□□ 0.32
PDCD2-204ENST00000453163 NPIPB11E5RHQ5 1161 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 PSPNO60542 156 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 NXPH3O95157 252 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 VDAC1P21796 283 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 ASCL1P50553 236 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 TESK1Q15569 626 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 PRAMEF6Q5VXH4 476 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 Q6ZRG5 221 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 SLC16A13Q7RTY0 426 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 OR5D13Q8NGL4 314 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 AKR1E2Q96JD6 320 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 HES4Q9HCC6 221 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 LUZP4Q9P127 313 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 IGHV2OR16-5A0A0B4J2B6 119 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 MBD3L4A6NDZ8 208 aaPredicted RBP17.07■□□□□ 0.32
PDCD2-204ENST00000453163 MBD3L3A6NE82 208 aaPredicted RBP17.07■□□□□ 0.32
PDCD2-204ENST00000453163 MBD3L5A6NJ08 208 aaPredicted RBP17.07■□□□□ 0.32
PDCD2-204ENST00000453163 SSSCA1O60232 199 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 IGLV2-14P01704 120 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 OR8U9P0C7N5 309 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 HMGN3Q15651 99 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 IGFL3Q6UXB1 125 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 BHLHA15Q7RTS1 189 aaPredicted RBP17.07■□□□□ 0.32
PDCD2-204ENST00000453163 RPRMLQ8N4K4 120 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 OR8U1Q8NH10 309 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 MBD3L2Q8NHZ7 208 aaPredicted RBP17.07■□□□□ 0.32
PDCD2-204ENST00000453163 PARP12Q9H0J9 701 aaKnown RBP17.07■□□□□ 0.32
PDCD2-204ENST00000453163 SEBOXQ9HB31 216 aaPredicted RBP17.07■□□□□ 0.32
PDCD2-204ENST00000453163 TAAR3PQ9P1P4 343 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 BSNQ9UPA5 3926 aa17.07■□□□□ 0.32
PDCD2-204ENST00000453163 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.06■□□□□ 0.32
PDCD2-204ENST00000453163 A6NLC8 198 aa17.06■□□□□ 0.32
PDCD2-204ENST00000453163 HSPA12AO43301 675 aa17.06■□□□□ 0.32
PDCD2-204ENST00000453163 FABP1P07148 127 aa17.06■□□□□ 0.32
PDCD2-204ENST00000453163 AGAP20933 346 aa17.06■□□□□ 0.32
PDCD2-204ENST00000453163 EIF2S3LQ2VIR3 472 aaKnown RBP17.06■□□□□ 0.32
PDCD2-204ENST00000453163 KDF1Q8NAX2 398 aaPredicted RBP17.06■□□□□ 0.32
PDCD2-204ENST00000453163 ARV1Q9H2C2 271 aa17.06■□□□□ 0.32
PDCD2-204ENST00000453163 MBNL3Q9NUK0 354 aaKnown RBP17.06■□□□□ 0.32
PDCD2-204ENST00000453163 DUXBA0A1W2PPF3 345 aa17.06■□□□□ 0.32
PDCD2-204ENST00000453163 FAM24AA6NFZ4 105 aa17.06■□□□□ 0.32
PDCD2-204ENST00000453163 K7EM74 188 aa17.06■□□□□ 0.32
PDCD2-204ENST00000453163 EWSR1Q01844 656 aaKnown RBP eCLIP17.06■□□□□ 0.32
PDCD2-204ENST00000453163 OR2C3Q8N628 320 aa17.06■□□□□ 0.32
PDCD2-204ENST00000453163 BCL2L14Q9BZR8 327 aa17.06■□□□□ 0.32
PDCD2-204ENST00000453163 UFSP2Q9NUQ7 469 aa17.06■□□□□ 0.32
PDCD2-204ENST00000453163 CADP27708 2225 aa17.06■□□□□ 0.32
PDCD2-204ENST00000453163 ATMQ13315 3056 aa17.06■□□□□ 0.32
PDCD2-204ENST00000453163 RP1L1Q8IWN7 2480 aaPredicted RBP17.06■□□□□ 0.32
PDCD2-204ENST00000453163 OR5H1A6NKK0 313 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 PROB1E7EW31 1015 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.05■□□□□ 0.32
PDCD2-204ENST00000453163 MT-ND4LP03901 98 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 TFF1P04155 84 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 PSG2P11465 335 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 S100GP29377 79 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 PPT1P50897 306 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 ZNF561Q8N587 486 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 CXXC4Q9H2H0 198 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 GSN-AS1Q9NRJ2 163 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 NBEAQ8NFP9 2946 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 A0A0G2JRQ6 117 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 CLEC18AA5D8T8 446 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 S100A9P06702 114 aaKnown RBP17.05■□□□□ 0.32
PDCD2-204ENST00000453163 KITLGP21583 273 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 AKR1C3P42330 323 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 P2RY6Q15077 328 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 AKIRIN2Q53H80 203 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 ALKBH2Q6NS38 261 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 CLEC18CQ8NCF0 446 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 TUBA4BQ9H853 241 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 RPS10P5Q9NQ39 176 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 WIPI2Q9Y4P8 454 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 CACNA1DQ01668 2161 aa17.05■□□□□ 0.32
PDCD2-204ENST00000453163 BORCS7-ASMTA0A0B4J1R7 106 aa17.04■□□□□ 0.32
PDCD2-204ENST00000453163 IGSF23A1L1A6 192 aa17.04■□□□□ 0.32
PDCD2-204ENST00000453163 FIP1L1Q6UN15 594 aaKnown RBP17.04■□□□□ 0.32
PDCD2-204ENST00000453163 Q6ZS92 163 aa17.04■□□□□ 0.32
PDCD2-204ENST00000453163 SH3BGRL3Q9H299 93 aa17.04■□□□□ 0.32
PDCD2-204ENST00000453163 PPP1R3CQ9UQK1 317 aa17.04■□□□□ 0.32
PDCD2-204ENST00000453163 KLK10O43240 276 aa17.04■□□□□ 0.32
PDCD2-204ENST00000453163 GCH1P30793 250 aa17.04■□□□□ 0.32
PDCD2-204ENST00000453163 ZNF718Q3SXZ3 478 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms