RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CECR9P0C854 216 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 MPC1LP0DKB6 136 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 HSPA9P38646 679 aaKnown RBP3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF138P52744 262 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 SNRPD2P62316 118 aaKnown RBP3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 RPS28P62857 69 aaKnown RBP3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 EMX2Q04743 252 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 REG3AQ06141 175 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 TMEM267Q0VDI3 215 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 ARFRP1Q13795 201 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 NEDD8Q15843 81 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 UBE2NLQ5JXB2 153 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 NXNL2Q5VZ03 156 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF343Q6P1L6 599 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 PLET1Q6UQ28 207 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF493Q6ZR52 646 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF589Q86UQ0 364 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 TMEM61Q8N0U2 210 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 CIARTQ8N365 385 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 GDPD1Q8N9F7 314 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 TSTD1Q8NFU3 115 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 VN1R17PQ8TDU5 208 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 OR5P3Q8WZ94 311 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 RPL36ALQ969Q0 106 aaKnown RBP3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 APOBEC3DQ96AK3 386 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF689Q96CS4 500 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 NEURL3Q96EH8 262 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 PDXPQ96GD0 296 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 SIGLEC12Q96PQ1 595 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 OR7D2Q96RA2 312 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 ANAPC13Q9BS18 74 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 DOHHQ9BU89 302 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 C19orf24Q9BVV8 132 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 TMEM222Q9H0R3 208 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 PARLQ9H300 379 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 RBM12B-AS1Q9P1G2 102 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 RFNGQ9Y644 331 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 PXMP4Q9Y6I8 212 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 GREB1LQ9C091 1923 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 ARAP1Q96P48 1450 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 CHD5Q8TDI0 1954 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 RTL1A6NKG5 1358 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 TONSLQ96HA7 1378 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 LRRK1Q38SD2 2015 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 CACNA1IQ9P0X4 2223 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 CD109Q6YHK3 1445 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 IGHV4-30-2A0A087WSY4 118 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 IGHV2-26A0A0B4J1V2 119 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 PVALEFA0A1B0GWK0 134 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 FAM92AA1XBS5 289 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 RPL37AP8A6NKH3 93 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 FFAR1O14842 300 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 SNAP91O60641 907 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 LYPLA1O75608 230 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 POP7O75817 140 aaKnown RBP3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 TNFSF15O95150 251 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 CDS2O95674 445 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 IGF2P01344 180 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 IFNA4P05014 189 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 LGALS1P09382 135 aaKnown RBP3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 OR12D1P0DN82 309 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 FOLR2P14207 255 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 LMO2P25791 158 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 RBP2P50120 134 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 MP68P56378 58 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 KRTAP10-11P60412 298 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 C16orf72Q14CZ0 275 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF404Q494X3 552 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 ABCA11PQ4W5N1 156 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 OR2B11Q5JQS5 317 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 COA6Q5JTJ3 125 aaKnown RBP3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 ARL9Q6T311 187 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 ACP7Q6ZNF0 438 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 Q6ZSR6 202 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 CLEC20AQ6ZU45 233 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 VN1R4Q7Z5H5 301 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 SLC25A45Q8N413 288 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 NKAPP1Q8N9T2 125 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 GPR119Q8TDV5 335 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 NPRL2Q8WTW4 380 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 THEM6Q8WUY1 208 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 DCAKDQ8WVC6 231 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 TWIST2Q8WVJ9 160 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 DCUN1D4Q92564 292 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 KLK6Q92876 244 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 GPR146Q96CH1 333 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 MALSU1Q96EH3 234 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 SLC45A3Q96JT2 553 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 OR2M2Q96R28 347 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 OR5M11Q96RB7 305 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 LYSMD1Q96S90 227 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF382Q96SR6 550 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 SLC25A2Q9BXI2 301 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 C20orf27Q9GZN8 174 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 VCXQ9H320 206 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 SLCO1B3Q9NPD5 702 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 U3KQ87 197 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 MYH10P35580 1976 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 C2orf16Q68DN1 1984 aa3.39□□□□□ -1.87
HMGB3P21-201ENST00000452483 CHD2O14647 1828 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms