RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 NANOGP1Q8N7R0 232 aa10.79□□□□□ -0.68
TOM1-211ENST00000449508 ZNF439Q8NDP4 499 aa10.79□□□□□ -0.68
TOM1-211ENST00000449508 THRSPQ92748 146 aa10.79□□□□□ -0.68
TOM1-211ENST00000449508 FAM46BQ96A09 425 aa10.79□□□□□ -0.68
TOM1-211ENST00000449508 Q96M66 194 aa10.79□□□□□ -0.68
TOM1-211ENST00000449508 S1PR3Q99500 378 aa10.79□□□□□ -0.68
TOM1-211ENST00000449508 MCRIP2Q9BUT9 160 aaKnown RBP10.79□□□□□ -0.68
TOM1-211ENST00000449508 GON7Q9BXV9 100 aa10.79□□□□□ -0.68
TOM1-211ENST00000449508 TAF9BQ9HBM6 251 aa10.79□□□□□ -0.68
TOM1-211ENST00000449508 OR2S2Q9NQN1 319 aa10.79□□□□□ -0.68
TOM1-211ENST00000449508 KCNIP1Q9NZI2 227 aa10.79□□□□□ -0.68
TOM1-211ENST00000449508 ERGIC3Q9Y282 383 aa10.79□□□□□ -0.68
TOM1-211ENST00000449508 SC5DO75845 299 aa10.78□□□□□ -0.68
TOM1-211ENST00000449508 RPLP1P05386 114 aaKnown RBP10.78□□□□□ -0.68
TOM1-211ENST00000449508 F2RL1P55085 397 aa10.78□□□□□ -0.68
TOM1-211ENST00000449508 EGFEM1PQ0D2K5 195 aa10.78□□□□□ -0.68
TOM1-211ENST00000449508 MORN2Q502X0 79 aa10.78□□□□□ -0.68
TOM1-211ENST00000449508 STEAP3Q658P3 488 aa10.78□□□□□ -0.68
TOM1-211ENST00000449508 SIGIRRQ6IA17 410 aa10.78□□□□□ -0.68
TOM1-211ENST00000449508 NKAIN3Q8N8D7 197 aa10.78□□□□□ -0.68
TOM1-211ENST00000449508 OR8H1Q8NGG4 311 aa10.78□□□□□ -0.68
TOM1-211ENST00000449508 TFAP2CQ92754 450 aa10.78□□□□□ -0.68
TOM1-211ENST00000449508 RBMXL1Q96E39 390 aaKnown RBP10.78□□□□□ -0.68
TOM1-211ENST00000449508 UQCC2Q9BRT2 126 aa10.78□□□□□ -0.68
TOM1-211ENST00000449508 RRP15Q9Y3B9 282 aaKnown RBP10.78□□□□□ -0.68
TOM1-211ENST00000449508 COL7A1Q02388 2944 aa10.78□□□□□ -0.68
TOM1-211ENST00000449508 ANKRD65E5RJM6 399 aa10.77□□□□□ -0.69
TOM1-211ENST00000449508 PDCD6O75340 191 aa10.77□□□□□ -0.69
TOM1-211ENST00000449508 SOX6P35712 828 aa10.77□□□□□ -0.69
TOM1-211ENST00000449508 ZNF137PP52743 207 aa10.77□□□□□ -0.69
TOM1-211ENST00000449508 GPR50Q13585 617 aa10.77□□□□□ -0.69
TOM1-211ENST00000449508 ACSM3Q53FZ2 586 aa10.77□□□□□ -0.69
TOM1-211ENST00000449508 CXorf66Q5JRM2 361 aaPredicted RBP10.77□□□□□ -0.69
TOM1-211ENST00000449508 UNQ9370/PRO34162Q6UXP9 181 aa10.77□□□□□ -0.69
TOM1-211ENST00000449508 LCNL1Q6ZST4 164 aa10.77□□□□□ -0.69
TOM1-211ENST00000449508 C5orf24Q7Z6I8 188 aa10.77□□□□□ -0.69
TOM1-211ENST00000449508 OR52L2PQ8NGH6 319 aa10.77□□□□□ -0.69
TOM1-211ENST00000449508 FBLIM1Q8WUP2 373 aa10.77□□□□□ -0.69
TOM1-211ENST00000449508 CYYR1Q96J86 154 aa10.77□□□□□ -0.69
TOM1-211ENST00000449508 DUX3Q96PT4 197 aa10.77□□□□□ -0.69
TOM1-211ENST00000449508 P2RX4Q99571 388 aa10.77□□□□□ -0.69
TOM1-211ENST00000449508 CST11Q9H112 138 aa10.77□□□□□ -0.69
TOM1-211ENST00000449508 DCLRE1BQ9H816 532 aa10.77□□□□□ -0.69
TOM1-211ENST00000449508 GHRLQ9UBU3 117 aa10.77□□□□□ -0.69
TOM1-211ENST00000449508 PTGES3LE9PB15 166 aa10.76□□□□□ -0.69
TOM1-211ENST00000449508 CCL24O00175 119 aa10.76□□□□□ -0.69
TOM1-211ENST00000449508 LANCL1O43813 399 aa10.76□□□□□ -0.69
TOM1-211ENST00000449508 RAB25P57735 213 aa10.76□□□□□ -0.69
TOM1-211ENST00000449508 INSL4Q14641 139 aa10.76□□□□□ -0.69
TOM1-211ENST00000449508 NKAPLQ5M9Q1 402 aa10.76□□□□□ -0.69
TOM1-211ENST00000449508 OGFRL1Q5TC84 451 aaPredicted RBP10.76□□□□□ -0.69
TOM1-211ENST00000449508 ZNF554Q86TJ5 538 aa10.76□□□□□ -0.69
TOM1-211ENST00000449508 FAM71E2Q8N5Q1 922 aa10.76□□□□□ -0.69
TOM1-211ENST00000449508 MS4A15Q8N5U1 240 aa10.76□□□□□ -0.69
TOM1-211ENST00000449508 MRPL30Q8TCC3 161 aaKnown RBP10.76□□□□□ -0.69
TOM1-211ENST00000449508 RAX2Q96IS3 184 aa10.76□□□□□ -0.69
TOM1-211ENST00000449508 NEDD4LQ96PU5 975 aa10.76□□□□□ -0.69
TOM1-211ENST00000449508 HSPB9Q9BQS6 159 aa10.76□□□□□ -0.69
TOM1-211ENST00000449508 MBNL3Q9NUK0 354 aaKnown RBP10.76□□□□□ -0.69
TOM1-211ENST00000449508 FKBP14Q9NWM8 211 aa10.76□□□□□ -0.69
TOM1-211ENST00000449508 H0YHG0 523 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 CASQ2O14958 399 aaPredicted RBP10.75□□□□□ -0.69
TOM1-211ENST00000449508 ELANEP08246 267 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 UBBP0CG47 229 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 VDAC1P21796 283 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 PPP1CCP36873 323 aaKnown RBP10.75□□□□□ -0.69
TOM1-211ENST00000449508 CDX1P47902 265 aaPredicted RBP10.75□□□□□ -0.69
TOM1-211ENST00000449508 GP2P55259 537 aaKnown RBP10.75□□□□□ -0.69
TOM1-211ENST00000449508 HTD2P86397 168 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 LSAMPQ13449 338 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 FOXE3Q13461 319 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 GNMTQ14749 295 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 FAM27D1Q5T7N8 215 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 GLT8D1Q68CQ7 371 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 OR10K2Q6IF99 312 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 GALMQ96C23 342 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 FAAP24Q9BTP7 215 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 ABHD14AQ9BUJ0 271 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 TMED9Q9BVK6 235 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 MND1Q9BWT6 205 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 VCXQ9H320 206 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 ZMAT5Q9UDW3 170 aaKnown RBP10.75□□□□□ -0.69
TOM1-211ENST00000449508 JPT1Q9UK76 154 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 LRRC42Q9Y546 428 aa10.75□□□□□ -0.69
TOM1-211ENST00000449508 YPEL1O60688 119 aa10.74□□□□□ -0.69
TOM1-211ENST00000449508 RGS11O94810 467 aa10.74□□□□□ -0.69
TOM1-211ENST00000449508 CDK1P06493 297 aa10.74□□□□□ -0.69
TOM1-211ENST00000449508 VSIG8P0DPA2 414 aa10.74□□□□□ -0.69
TOM1-211ENST00000449508 SLC2A2P11168 524 aaPredicted RBP10.74□□□□□ -0.69
TOM1-211ENST00000449508 SRMP19623 302 aa10.74□□□□□ -0.69
TOM1-211ENST00000449508 MYF6P23409 242 aa10.74□□□□□ -0.69
TOM1-211ENST00000449508 KIR2DS1Q14954 304 aa10.74□□□□□ -0.69
TOM1-211ENST00000449508 MMDQ15546 238 aa10.74□□□□□ -0.69
TOM1-211ENST00000449508 DEFB136Q30KP8 78 aa10.74□□□□□ -0.69
TOM1-211ENST00000449508 RBM48Q5RL73 367 aaKnown RBP10.74□□□□□ -0.69
TOM1-211ENST00000449508 VAX1Q5SQQ9 334 aa10.74□□□□□ -0.69
TOM1-211ENST00000449508 C6orf201Q7Z4U5 140 aa10.74□□□□□ -0.69
TOM1-211ENST00000449508 ODF3L1Q8IXM7 274 aa10.74□□□□□ -0.69
TOM1-211ENST00000449508 OR8U1Q8NH10 309 aa10.74□□□□□ -0.69
TOM1-211ENST00000449508 YPEL2Q96QA6 119 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms