RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 DLX6P56179 175 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 RGS21Q2M5E4 152 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 IDO2Q6ZQW0 420 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 GLCCI1Q86VQ1 547 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 TMEM17Q86X19 198 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 ARRDC1Q8N5I2 433 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 LY6G5BQ8NDX9 201 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 MMP26Q9NRE1 261 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 SETXQ7Z333 2677 aaKnown RBP12.02□□□□□ -0.49
TNF-208ENST00000449264 IGHV2-70DA0A0C4DH43 119 aa12.02□□□□□ -0.49
TNF-208ENST00000449264 FAM240BA0A1B0GVZ2 78 aa12.02□□□□□ -0.49
TNF-208ENST00000449264 CEACAM6P40199 344 aa12.02□□□□□ -0.49
TNF-208ENST00000449264 FXYD4P59646 89 aa12.02□□□□□ -0.49
TNF-208ENST00000449264 ARF6P62330 175 aa12.02□□□□□ -0.49
TNF-208ENST00000449264 HTD2P86397 168 aa12.02□□□□□ -0.49
TNF-208ENST00000449264 LOXL1Q08397 574 aaPredicted RBP12.02□□□□□ -0.49
TNF-208ENST00000449264 C11orf91Q3C1V1 193 aa12.02□□□□□ -0.49
TNF-208ENST00000449264 HEPN1Q6WQI6 88 aa12.02□□□□□ -0.49
TNF-208ENST00000449264 NRARPQ7Z6K4 114 aa12.02□□□□□ -0.49
TNF-208ENST00000449264 OR6F1Q8NGZ6 308 aa12.02□□□□□ -0.49
TNF-208ENST00000449264 LEAP2Q969E1 77 aa12.02□□□□□ -0.49
TNF-208ENST00000449264 PRRT1Q99946 306 aa12.02□□□□□ -0.49
TNF-208ENST00000449264 PARP12Q9H0J9 701 aaKnown RBP12.02□□□□□ -0.49
TNF-208ENST00000449264 RDH8Q9NYR8 311 aa12.02□□□□□ -0.49
TNF-208ENST00000449264 SCP2D1Q9UJQ7 156 aa12.02□□□□□ -0.49
TNF-208ENST00000449264 JPT1Q9UK76 154 aa12.02□□□□□ -0.49
TNF-208ENST00000449264 AADACP22760 399 aa12.01□□□□□ -0.49
TNF-208ENST00000449264 DLX1P56177 255 aa12.01□□□□□ -0.49
TNF-208ENST00000449264 HERV-K104P61576 105 aa12.01□□□□□ -0.49
TNF-208ENST00000449264 PRB3Q04118 309 aaPredicted RBP12.01□□□□□ -0.49
TNF-208ENST00000449264 UTF1Q5T230 341 aa12.01□□□□□ -0.49
TNF-208ENST00000449264 BTNL3Q6UXE8 466 aa12.01□□□□□ -0.49
TNF-208ENST00000449264 TOMM40LQ969M1 308 aa12.01□□□□□ -0.49
TNF-208ENST00000449264 SUCNR1Q9BXA5 334 aa12.01□□□□□ -0.49
TNF-208ENST00000449264 LINC00574Q9H8X3 128 aa12.01□□□□□ -0.49
TNF-208ENST00000449264 GFOD1Q9NXC2 390 aa12.01□□□□□ -0.49
TNF-208ENST00000449264 C17orf98A8MV24 154 aa12□□□□□ -0.49
TNF-208ENST00000449264 DIRAS3O95661 229 aa12□□□□□ -0.49
TNF-208ENST00000449264 PTTG1O95997 202 aa12□□□□□ -0.49
TNF-208ENST00000449264 PPYP01298 95 aa12□□□□□ -0.49
TNF-208ENST00000449264 MSMBP08118 114 aa12□□□□□ -0.49
TNF-208ENST00000449264 IGHV1-8P0DP01 117 aa12□□□□□ -0.49
TNF-208ENST00000449264 SLC6A1P30531 599 aa12□□□□□ -0.49
TNF-208ENST00000449264 GNG10P50151 68 aa12□□□□□ -0.49
TNF-208ENST00000449264 LOXL3P58215 753 aa12□□□□□ -0.49
TNF-208ENST00000449264 PAX2Q02962 417 aa12□□□□□ -0.49
TNF-208ENST00000449264 ZNF660Q6AZW8 331 aaPredicted RBP12□□□□□ -0.49
TNF-208ENST00000449264 H1FOOQ8IZA3 346 aaPredicted RBP12□□□□□ -0.49
TNF-208ENST00000449264 DACT3Q96B18 629 aaPredicted RBP12□□□□□ -0.49
TNF-208ENST00000449264 DPAGT1Q9H3H5 408 aa12□□□□□ -0.49
TNF-208ENST00000449264 SIRT7Q9NRC8 400 aa12□□□□□ -0.49
TNF-208ENST00000449264 SLC2A8Q9NY64 477 aa12□□□□□ -0.49
TNF-208ENST00000449264 ZNF469Q96JG9 3925 aaPredicted RBP12□□□□□ -0.49
TNF-208ENST00000449264 hCG_1809904A0A1W2PP81 198 aa12□□□□□ -0.49
TNF-208ENST00000449264 A0A1W2PPE2 198 aa12□□□□□ -0.49
TNF-208ENST00000449264 A0A1W2PR64 198 aa12□□□□□ -0.49
TNF-208ENST00000449264 A0A1W2PRV1 198 aa12□□□□□ -0.49
TNF-208ENST00000449264 OR5H14A6NHG9 310 aa12□□□□□ -0.49
TNF-208ENST00000449264 B4DSR2 109 aa12□□□□□ -0.49
TNF-208ENST00000449264 SPNP16150 400 aa12□□□□□ -0.49
TNF-208ENST00000449264 C11orf42Q8N5U0 333 aa12□□□□□ -0.49
TNF-208ENST00000449264 OR13C8Q8NGS7 320 aa12□□□□□ -0.49
TNF-208ENST00000449264 FXYD6Q9H0Q3 95 aa12□□□□□ -0.49
TNF-208ENST00000449264 RBM7Q9Y580 266 aaKnown RBP12□□□□□ -0.49
TNF-208ENST00000449264 SESN1Q9Y6P5 492 aa12□□□□□ -0.49
TNF-208ENST00000449264 A0A1W2PPE3 182 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 M0R1W7 72 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 SMAD7O15105 426 aaKnown RBP11.99□□□□□ -0.49
TNF-208ENST00000449264 TUSC2O75896 110 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 RGS11O94810 467 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 DVL1P1P54792 670 aaPredicted RBP11.99□□□□□ -0.49
TNF-208ENST00000449264 BAMBIQ13145 260 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 RBMS2Q15434 407 aaKnown RBP11.99□□□□□ -0.49
TNF-208ENST00000449264 TMEM249Q2WGJ8 235 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 TMEM30BQ3MIR4 351 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 AADACL3Q5VUY0 350 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 METTL11BQ5VVY1 283 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 DHRS11Q6UWP2 260 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 LHFPL1Q86WI0 220 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 Q8N7P7 452 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 LINC01356Q8N9X3 169 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 OR2AK2Q8NG84 335 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 OR10A7Q8NGE5 316 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 TERB2Q8NHR7 220 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 GIMAP1Q8WWP7 306 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 MRGPRFQ96AM1 343 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 MOB3AQ96BX8 217 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 OCEL1Q9H607 264 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 POLR3KQ9Y2Y1 108 aaPredicted RBP11.99□□□□□ -0.49
TNF-208ENST00000449264 OR2W1Q9Y3N9 320 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 ABCA1O95477 2261 aa11.99□□□□□ -0.49
TNF-208ENST00000449264 TRAV6A0A075B6T7 132 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 IGKV1D-13A0A0B4J2D9 117 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 ST8SIA5O15466 376 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 RBP4P02753 201 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 IGKV1-13P0DP09 117 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 PGAM2P15259 253 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 COX7A1P24310 79 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 TRIM16LQ309B1 348 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 MORN2Q502X0 79 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms