RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 HTR2BP41595 481 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 UBA52P62987 128 aaKnown RBP8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 AESQ08117 197 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 IL15RAQ13261 267 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 C8orf86Q6ZUL3 223 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 ZNF695Q8IW36 515 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 PRR18Q8N4B5 295 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 ZBTB34Q8NCN2 500 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 LILRB4Q8NHJ6 448 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 FAM222BQ8WU58 562 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 IL22RA2Q969J5 263 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 MSI2Q96DH6 328 aaKnown RBP8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 C18orf12Q96KH6 178 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 TMEM56Q96MV1 263 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 EGLN1Q9GZT9 426 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 TOLLIPQ9H0E2 274 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 GCM1Q9NP62 436 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 CCL28Q9NRJ3 127 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 PRR13Q9NZ81 148 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 GSKIPQ9P0R6 139 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 KIF25Q9UIL4 384 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 TMEM56-RWDD3S4R434 201 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 RNF212BA8MTL3 300 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 H0Y980 276 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 HSD17B6O14756 317 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 SPINT2O43291 252 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 BCL2L11O43521 198 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 CDS2O95674 445 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 SCGB1D2O95969 90 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 MUC1P15941 1255 aaPredicted RBP8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 EGR1P18146 543 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 GZMHP20718 246 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 CEACAM6P40199 344 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 EXOSC2Q13868 293 aaKnown RBP8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 MSMO1Q15800 293 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 SP6Q3SY56 376 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 C1orf87Q8N0U7 546 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 ZNF561Q8N587 486 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 CD177Q8N6Q3 437 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 BOLLQ8N9W6 283 aaKnown RBP8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 COQ2Q96H96 371 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 RCC1LQ96I51 464 aaKnown RBP8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 FAM210AQ96ND0 272 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 TP53RKQ96S44 253 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 PPP1R3CQ9UQK1 317 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 SHANK1Q9Y566 2161 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 CEP295Q9C0D2 2601 aa8.85□□□□□ -0.99
VIPAS39-203ENST00000448935 IGKV1D-17A0A075B6S4 117 aa8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 C12orf77C9JDV5 145 aa8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 ZNF737O75373 536 aa8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 PGLYRP1O75594 196 aaPredicted RBP8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 F2RP25116 425 aa8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 UCP1P25874 307 aa8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 AP2S1P53680 142 aaPredicted RBP8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 TLE1Q04724 770 aa8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 RAB32Q13637 225 aa8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 TMEM268Q5VZI3 342 aa8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 ADAM5Q6NVV9 412 aa8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 MEX3BQ6ZN04 569 aaKnown RBP8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 OR8H3Q8N146 312 aa8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 CA5BP1Q8WTZ4 195 aa8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 SHARPINQ9H0F6 387 aa8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 FAM234AQ9H0X4 552 aa8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 MS4A5Q9H3V2 200 aa8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 KCNJ16Q9NPI9 418 aa8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 OR1A1Q9P1Q5 309 aa8.84□□□□□ -0.99
VIPAS39-203ENST00000448935 TRAV39A0A0B4J263 110 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 RNF222A6NCQ9 220 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 FAM90A27PA6NNH2 459 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 MPTX1A8MV57 137 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 K7N7A8 449 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 HBZP02008 142 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 APOBEC3AP31941 199 aaPredicted RBP8.83□□□□□ -1
VIPAS39-203ENST00000448935 GLIPR1P48060 266 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 S100A10P60903 97 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 HTD2P86397 168 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 EFNB3Q15768 340 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 BEX5Q5H9J7 111 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 LYZL2Q7Z4W2 148 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 C5orf24Q7Z6I8 188 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 SLC7A5P1Q8MH63 180 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 ANGPTL6Q8NI99 470 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 SCARB1Q8WTV0 552 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 RBPMSQ93062 196 aaKnown RBP8.83□□□□□ -1
VIPAS39-203ENST00000448935 SDSLQ96GA7 329 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 ABHD14BQ96IU4 210 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 ARPC5LQ9BPX5 153 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 RNF126Q9BV68 326 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 ZNF665Q9H7R5 613 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 PLEKHF2Q9H8W4 249 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 LIN7CQ9NUP9 197 aaKnown RBP8.83□□□□□ -1
VIPAS39-203ENST00000448935 OR6C3Q9NZP0 311 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 USP24Q9UPU5 2620 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 ODAMA1E959 279 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 NKX6-3A6NJ46 265 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 SHISA9B4DS77 424 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 SHOXO15266 292 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 SERPINE2P07093 398 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 VDAC1P21796 283 aa8.83□□□□□ -1
VIPAS39-203ENST00000448935 CR1LQ2VPA4 569 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms