RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ADAM30Q9UKF2 790 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 HSF4Q9ULV5 492 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 KIAA2026Q5HYC2 2103 aa11.12□□□□□ -0.63
PDLIM2-213ENST00000448520 P2RX3P56373 397 aa11.12□□□□□ -0.63
PDLIM2-213ENST00000448520 LGALS4P56470 323 aa11.12□□□□□ -0.63
PDLIM2-213ENST00000448520 ARFRP1Q13795 201 aa11.12□□□□□ -0.63
PDLIM2-213ENST00000448520 ZNF273Q14593 569 aa11.12□□□□□ -0.63
PDLIM2-213ENST00000448520 FAM189A2Q15884 450 aa11.12□□□□□ -0.63
PDLIM2-213ENST00000448520 ZNF497Q6ZNH5 498 aa11.12□□□□□ -0.63
PDLIM2-213ENST00000448520 CCDC190Q86UF4 302 aa11.12□□□□□ -0.63
PDLIM2-213ENST00000448520 FAM185AQ8N0U4 392 aa11.12□□□□□ -0.63
PDLIM2-213ENST00000448520 PPP1R35Q8TAP8 253 aa11.12□□□□□ -0.63
PDLIM2-213ENST00000448520 UBALD1Q8TB05 177 aa11.12□□□□□ -0.63
PDLIM2-213ENST00000448520 MRPL30Q8TCC3 161 aaKnown RBP11.12□□□□□ -0.63
PDLIM2-213ENST00000448520 MAFIPQ8WZ33 124 aa11.12□□□□□ -0.63
PDLIM2-213ENST00000448520 CFHR4Q92496 578 aa11.12□□□□□ -0.63
PDLIM2-213ENST00000448520 ABHD1Q96SE0 405 aa11.12□□□□□ -0.63
PDLIM2-213ENST00000448520 CMSS1Q9BQ75 279 aaKnown RBP11.12□□□□□ -0.63
PDLIM2-213ENST00000448520 V9GYH0 126 aa11.12□□□□□ -0.63
PDLIM2-213ENST00000448520 MEIKINA0A087WXM9 373 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 A0A0A6YYH2 397 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 TMEM30CPA0ZSE6 113 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 ODAMA1E959 279 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 A6NJ64 397 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 SCGNO76038 276 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 MT-ND4P03905 459 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 CSN2P05814 226 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 GSTP1P09211 210 aaKnown RBP11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 CD3GP09693 182 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 CCL3L1P16619 93 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 TALDO1P37837 337 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 RPL31P62899 125 aaKnown RBP11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 RBM39Q14498 530 aaKnown RBP11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 LY6EQ16553 131 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 FAM131AQ6UXB0 335 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 OR13A1Q8NGR1 328 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 SETD6Q8TBK2 473 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 MRGPRDQ8TDS7 321 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 AJUBAQ96IF1 538 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 SOSTQ9BQB4 213 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 NPFFR1Q9GZQ6 430 aa11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 ZNF230Q9UIE0 474 aaPredicted RBP11.11□□□□□ -0.63
PDLIM2-213ENST00000448520 FABP12A6NFH5 140 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 NAPSAO96009 420 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 GLAP06280 429 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 RCC1P18754 421 aaPredicted RBP11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 MNDAP41218 407 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 GLP1RP43220 463 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 GNG2P59768 71 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 ERVFRD-1P60508 538 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 DGCR2P98153 550 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 IL18Q14116 193 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 ZNF79Q15937 498 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 BEAN1Q3B7T3 259 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 KPRPQ5T749 579 aaPredicted RBP11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 HACD4Q5VWC8 232 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 TMEM200BQ69YZ2 307 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 REC114Q7Z4M0 266 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 MFSD4AQ8N468 514 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 C17orf50Q8WW18 174 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 CHMP1AQ9HD42 196 aaPredicted RBP11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 AKIP1Q9NQ31 210 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 SIGLEC9Q9Y336 463 aa11.1□□□□□ -0.63
PDLIM2-213ENST00000448520 IGKV1D-8A0A087WSZ0 117 aa11.09□□□□□ -0.63
PDLIM2-213ENST00000448520 SERPINE3A8MV23 424 aa11.09□□□□□ -0.63
PDLIM2-213ENST00000448520 G3V4G9 280 aa11.09□□□□□ -0.63
PDLIM2-213ENST00000448520 FCGR3AP08637 254 aa11.09□□□□□ -0.63
PDLIM2-213ENST00000448520 KCNJ3P48549 501 aa11.09□□□□□ -0.63
PDLIM2-213ENST00000448520 SAMD5Q5TGI4 173 aa11.09□□□□□ -0.63
PDLIM2-213ENST00000448520 FAM53AQ6NSI3 398 aaPredicted RBP11.09□□□□□ -0.63
PDLIM2-213ENST00000448520 TRAPPC6BQ86SZ2 158 aa11.09□□□□□ -0.63
PDLIM2-213ENST00000448520 GAPTQ8N292 157 aa11.09□□□□□ -0.63
PDLIM2-213ENST00000448520 C11orf42Q8N5U0 333 aa11.09□□□□□ -0.63
PDLIM2-213ENST00000448520 KLHDC1Q8N7A1 406 aa11.09□□□□□ -0.63
PDLIM2-213ENST00000448520 GVQW1Q8N7I0 195 aa11.09□□□□□ -0.63
PDLIM2-213ENST00000448520 C12orf4Q9NQ89 552 aa11.09□□□□□ -0.63
PDLIM2-213ENST00000448520 TRAPPC2LQ9UL33 140 aa11.09□□□□□ -0.63
PDLIM2-213ENST00000448520 VGLL3A8MV65 326 aa11.08□□□□□ -0.64
PDLIM2-213ENST00000448520 H3BUI4 141 aa11.08□□□□□ -0.64
PDLIM2-213ENST00000448520 ERP29P30040 261 aaKnown RBP11.08□□□□□ -0.64
PDLIM2-213ENST00000448520 SSTR5P35346 364 aa11.08□□□□□ -0.64
PDLIM2-213ENST00000448520 GDNFP39905 211 aa11.08□□□□□ -0.64
PDLIM2-213ENST00000448520 PNLIPRP3Q17RR3 467 aa11.08□□□□□ -0.64
PDLIM2-213ENST00000448520 UTF1Q5T230 341 aa11.08□□□□□ -0.64
PDLIM2-213ENST00000448520 BAIAP2L2Q6UXY1 529 aa11.08□□□□□ -0.64
PDLIM2-213ENST00000448520 OR52I2Q8NH67 350 aa11.08□□□□□ -0.64
PDLIM2-213ENST00000448520 PIFOQ8TCI5 191 aa11.08□□□□□ -0.64
PDLIM2-213ENST00000448520 MALSU1Q96EH3 234 aa11.08□□□□□ -0.64
PDLIM2-213ENST00000448520 Q9N2K0 584 aa11.08□□□□□ -0.64
PDLIM2-213ENST00000448520 MMP23AO75900 390 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 VSIG10L2P0DP72 767 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 PRSS3P35030 304 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 ETV6P41212 452 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 DLX6P56179 175 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 PAX5Q02548 391 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 LTC4SQ16873 150 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 C17orf58Q2M2W7 97 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 PYDC2Q56P42 97 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 SPANXN2Q5MJ10 180 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms