RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 TMEM50BP56557 158 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 OR10A3P58181 314 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 HNF4GQ14541 408 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 TMEM95Q3KNT9 176 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 TMEM30BQ3MIR4 351 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 ABCA11PQ4W5N1 156 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 MORN2Q502X0 79 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 ARSJQ5FYB0 599 aaPredicted RBP10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 CT45A1Q5HYN5 189 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 HES5Q5TA89 166 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 SLC25A48Q6ZT89 311 aaKnown RBP10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 ZNF554Q86TJ5 538 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 OR52L2PQ8NGH6 319 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 OR10V1Q8NGI7 309 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 CT45A3Q8NHU0 189 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 WIPF2Q8TF74 440 aaPredicted RBP10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 FAM3DQ96BQ1 224 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 URM1Q9BTM9 101 aaKnown RBP10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 WNT10AQ9GZT5 417 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 OR2S2Q9NQN1 319 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 PLEKHJ1Q9NW61 149 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 IGHV1-3A0A0C4DH29 117 aa10.15□□□□□ -0.78
PRPF40A-203ENST00000448428 FOXI3A8MTJ6 420 aaPredicted RBP10.15□□□□□ -0.78
PRPF40A-203ENST00000448428 PDCD5O14737 125 aa10.15□□□□□ -0.78
PRPF40A-203ENST00000448428 LDLRAD4O15165 306 aa10.15□□□□□ -0.78
PRPF40A-203ENST00000448428 PEX14O75381 377 aa10.15□□□□□ -0.78
PRPF40A-203ENST00000448428 NAPSAO96009 420 aa10.15□□□□□ -0.78
PRPF40A-203ENST00000448428 CD28P10747 220 aa10.15□□□□□ -0.78
PRPF40A-203ENST00000448428 GALP22466 123 aa10.15□□□□□ -0.78
PRPF40A-203ENST00000448428 VDAC2P45880 294 aaPredicted RBP10.15□□□□□ -0.78
PRPF40A-203ENST00000448428 VEGFCP49767 419 aa10.15□□□□□ -0.78
PRPF40A-203ENST00000448428 HES1Q14469 280 aa10.15□□□□□ -0.78
PRPF40A-203ENST00000448428 C22orf42Q6IC83 251 aa10.15□□□□□ -0.78
PRPF40A-203ENST00000448428 Q6ZPA2 131 aa10.15□□□□□ -0.78
PRPF40A-203ENST00000448428 MOB3BQ86TA1 216 aa10.15□□□□□ -0.78
PRPF40A-203ENST00000448428 MMP27Q9H306 513 aa10.15□□□□□ -0.78
PRPF40A-203ENST00000448428 STEAP1Q9UHE8 339 aa10.15□□□□□ -0.78
PRPF40A-203ENST00000448428 NBEAL1Q6ZS30 2694 aa10.15□□□□□ -0.78
PRPF40A-203ENST00000448428 WNK1Q9H4A3 2382 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 IGHV3-72A0A0B4J1Y9 119 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 TMEM272A0A1B0GTI8 110 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 M0QZK8 103 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 IGKV1D-33P01593 117 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 IGKV1-33P01594 117 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 LPLP06858 475 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 CSF1P09603 554 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 TMEM11P17152 192 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 IL3RAP26951 378 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 PSMB9P28065 219 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 HTD2P86397 168 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 PLA2G7Q13093 441 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 EBI3Q14213 229 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 GNMTQ14749 295 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 HMGN3Q15651 99 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 C2orf68Q2NKX9 166 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 STEAP3Q658P3 488 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 ZNF880Q6PDB4 577 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 ZNF773Q6PK81 442 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 RTN4IP1Q8WWV3 396 aaPredicted RBP10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 FCGR1BQ92637 280 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 GALMQ96C23 342 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 AK3Q9UIJ7 227 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 HSF4Q9ULV5 492 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 MOB4Q9Y3A3 225 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 PKD1L1Q8TDX9 2849 aa10.14□□□□□ -0.79
PRPF40A-203ENST00000448428 IFITM5A6NNB3 132 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 ZNF736B4DX44 427 aaPredicted RBP10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 YPEL1O60688 119 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 FBXO24O75426 580 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 RAB3BP20337 219 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 MYL9P24844 172 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 FGF9P31371 208 aaPredicted RBP10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 PPP1CCP36873 323 aaKnown RBP10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 RANBP1P43487 201 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 ZNF137PP52743 207 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 C9orf152Q5JTZ5 239 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 NR2C2APQ86WQ0 139 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 LYG1Q8N1E2 194 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 OR5AU1Q8NGC0 362 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 FAM110DQ8TAY7 271 aaPredicted RBP10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 SETD6Q8TBK2 473 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 RBMXL1Q96E39 390 aaKnown RBP10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 ARHGAP5-AS1Q96IT6 56 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 EAF1Q96JC9 268 aaPredicted RBP10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 YPEL2Q96QA6 119 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 HDHD3Q9BSH5 251 aaPredicted RBP10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 PECRQ9BY49 303 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 RIMS4Q9H426 269 aaPredicted RBP10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 CHMP1AQ9HD42 196 aaPredicted RBP10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 TXNL4BQ9NX01 149 aaKnown RBP10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 ABRACLQ9P1F3 81 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 JPT1Q9UK76 154 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 RAB22AQ9UL26 194 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 TRRAPQ9Y4A5 3859 aa10.13□□□□□ -0.79
PRPF40A-203ENST00000448428 TRBV6-6A0A0A6YYG2 114 aa10.12□□□□□ -0.79
PRPF40A-203ENST00000448428 CD1BP29016 333 aa10.12□□□□□ -0.79
PRPF40A-203ENST00000448428 PLAC9Q5JTB6 97 aa10.12□□□□□ -0.79
PRPF40A-203ENST00000448428 LY6G6FQ5SQ64 297 aa10.12□□□□□ -0.79
PRPF40A-203ENST00000448428 CENPVQ7Z7K6 275 aaPredicted RBP10.12□□□□□ -0.79
PRPF40A-203ENST00000448428 TGIF2LXQ8IUE1 241 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms