RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SYPL2Q5VXT5 272 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 SAXO2Q658L1 398 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 LINC00596Q86U02 117 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 TMEM256Q8N2U0 113 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR4C13Q8NGP0 309 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR5M1Q8NGP8 315 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 HAVCR2Q8TDQ0 301 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 ASB13Q8WXK3 278 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 OTUB2Q96DC9 234 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 ZNF799Q96GE5 643 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 PRSS27Q9BQR3 290 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 ANAPC13Q9BS18 74 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 TSGA10Q9BZW7 698 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 CHST5Q9GZS9 411 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 CA10Q9NS85 328 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 ZNF222Q9UK12 451 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 SLC22A13Q9Y226 551 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 NSD3Q9BZ95 1437 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 NHSQ6T4R5 1651 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 CASP8AP2Q9UKL3 1982 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 TRPM1Q7Z4N2 1603 aa2.9□□□□□ -1.94
HMGB1P48-201ENST00000446155 TRBV6-6A0A0A6YYG2 114 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 ACOX3O15254 700 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 COX7A2P2O60397 106 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 FOXH1O75593 365 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 PSMA1P25786 263 aaKnown RBP2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 GTF2BQ00403 316 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 C2orf83Q53S99 150 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 TEX30Q5JUR7 227 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 NXNL2Q5VZ03 156 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 CYB5R2Q6BCY4 276 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 GLYATQ6IB77 296 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 SLC25A45Q8N413 288 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZIC4Q8N9L1 334 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 TTLQ8NG68 377 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 DTD1Q8TEA8 209 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 SLC37A2Q8TED4 501 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 TWIST2Q8WVJ9 160 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 CLDN23Q96B33 292 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 ELSPBP1Q96BH3 223 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 YPEL4Q96NS1 127 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 EBPLQ9BY08 206 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 BCL2L14Q9BZR8 327 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 VSIRQ9H7M9 311 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZNRD1Q9P1U0 126 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZNF780BQ9Y6R6 833 aa2.9□□□□□ -1.95
HMGB1P48-201ENST00000446155 ABCC6O95255 1503 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 BTAF1O14981 1849 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 IGHV2-26A0A0B4J1V2 119 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 WI2-2373I1.2A0A1W2PRP0 233 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 TMEM223A0PJW6 202 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 LGALS9O00182 355 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 DCTN3O75935 186 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 IGLV3-25P01717 112 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZNF823P16415 610 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 CFL1P23528 166 aaKnown RBP2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 ELK4P28324 431 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 RPL12P30050 165 aaKnown RBP2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 AGTR1P30556 359 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 PPP1R2P41236 205 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 LSM6P62312 80 aaKnown RBP2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 PPP1R1AQ13522 171 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 ELOCQ15369 112 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 PPP1R2P3Q6NXS1 205 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 SHISA6Q6ZSJ9 500 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 CLEC20AQ6ZU45 233 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 OLIG3Q7RTU3 272 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 PDPNQ86YL7 162 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 TRAPPC5Q8IUR0 188 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 ITPRIPQ8IWB1 547 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZFP82Q8N141 532 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 STK40Q8N2I9 435 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 ARIH2OSQ8N7S6 290 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 FAM57AQ8TBR7 257 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 CYGBQ8WWM9 190 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 TLCD1Q96CP7 247 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 NARS2Q96I59 477 aaKnown RBP2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 CHCHD7Q9BUK0 85 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 MROQ9BYG7 248 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZNF436Q9C0F3 470 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 PRO3102Q9H379 93 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 SND1-IT1Q9HBX3 110 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 LHX9Q9NQ69 397 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 POMPQ9Y244 141 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 ALG5Q9Y673 324 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 RGPD8O14715 1765 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 TUBGCP6Q96RT7 1819 aa2.89□□□□□ -1.95
HMGB1P48-201ENST00000446155 ANKRD11Q6UB99 2663 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 LRP4O75096 1905 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 PIK3C2GO75747 1445 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 CPSF1Q10570 1443 aaKnown RBP2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 A0A096LNJ9 63 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 IGHV3-49A0A0A0MS15 119 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 A0A1W2PNU3 283 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 C9JQL5 133 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 TCF21O43680 179 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 SCO1O75880 301 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 ARL6IP5O75915 188 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 OR5F1O95221 314 aa2.88□□□□□ -1.95
HMGB1P48-201ENST00000446155 NSA2O95478 260 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms