RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 FGF12P61328 243 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 ERVS71-1P61550 626 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 ZFP36L1Q07352 338 aaKnown RBP12.1□□□□□ -0.47
ERCC3-203ENST00000445889 PRSS8Q16651 343 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 HAPLN4Q86UW8 402 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 OR10J5Q8NHC4 309 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 PSMF1Q92530 271 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 WFIKKN1Q96NZ8 548 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 SH2D2AQ9NP31 389 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 PSENENQ9NZ42 101 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 PRR14LQ5THK1 2151 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 GTF3C1Q12789 2109 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 LRRC3CA6NJW4 275 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 C9J4A7 227 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 TUSC2O75896 110 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 NDUFB7P17568 137 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 MKXQ8IYA7 352 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 LILRB2Q8N423 598 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 RCC1LQ96I51 464 aaKnown RBP12.1□□□□□ -0.47
ERCC3-203ENST00000445889 ATP23Q9Y6H3 246 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 GJE1A6NN92 205 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 TSTD3H0UI37 97 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 IFNL4K9M1U5 179 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 CYB5R3P00387 301 aaPredicted RBP12.1□□□□□ -0.47
ERCC3-203ENST00000445889 ZXDAP98168 799 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 SPINK9Q5DT21 86 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 SPEM1Q8N4L4 309 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 MRPL30Q8TCC3 161 aaKnown RBP12.1□□□□□ -0.47
ERCC3-203ENST00000445889 HLA-CQ95604 372 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 CLDN23Q96B33 292 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 C1QTNF5Q9BXJ0 243 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 MRPS17Q9Y2R5 130 aaKnown RBP12.1□□□□□ -0.47
ERCC3-203ENST00000445889 BOD1L1Q8NFC6 3051 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 TRAV24A0A0B4J272 114 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 UBE2L5PA0A1B0GUS4 154 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 K7ESF4 209 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 DFFBO76075 338 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 CEACAM1P13688 526 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 SRD5A2P31213 254 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 PCBD1P61457 104 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 LYSMD4Q5XG99 296 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 H1FOOQ8IZA3 346 aaPredicted RBP12.09□□□□□ -0.47
ERCC3-203ENST00000445889 CA5BP1Q8WTZ4 195 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 DUSP23Q9BVJ7 150 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 REPIN1Q9BWE0 567 aaKnown RBP12.09□□□□□ -0.47
ERCC3-203ENST00000445889 SDF2L1Q9HCN8 221 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 OR14J1Q9UGF5 321 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 ELOA3CA0A087WX78 387 aaPredicted RBP12.09□□□□□ -0.47
ERCC3-203ENST00000445889 ZNF705GA8MUZ8 300 aaPredicted RBP12.09□□□□□ -0.47
ERCC3-203ENST00000445889 KIAA1324LA8MWY0 1029 aaPredicted RBP12.09□□□□□ -0.47
ERCC3-203ENST00000445889 SIRPB1O00241 398 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 IGKV1D-33P01593 117 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 IGKV1-33P01594 117 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 CA6P23280 308 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 LINC00205P59089 165 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 KRTAP27-1Q3LI81 207 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 OR4X1Q8NH49 305 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 OR4C12Q96R67 309 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 ELOVL1Q9BW60 279 aa12.09□□□□□ -0.47
ERCC3-203ENST00000445889 IGKV1-5P01602 117 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 TRIM61Q5EBN2 209 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 OR5D13Q8NGL4 314 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 OR2Y1Q8NGV0 311 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 OR13D1Q8NGV5 346 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 M1APQ8TC57 530 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 PCED1AQ9H1Q7 454 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 OR2W1Q9Y3N9 320 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 NCOR1O75376 2440 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 CLEC18AA5D8T8 446 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 CD300LBA8K4G0 201 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 FAM166BA8MTA8 275 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 H0Y980 276 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 SYNGR2O43760 224 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 TFF1P04155 84 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 PKIAP61925 76 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 USF2Q15853 346 aaPredicted RBP12.08□□□□□ -0.48
ERCC3-203ENST00000445889 ZNF324BQ6AW86 544 aaPredicted RBP12.08□□□□□ -0.48
ERCC3-203ENST00000445889 CLEC18CQ8NCF0 446 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 GTF3AQ92664 365 aaKnown RBP12.08□□□□□ -0.48
ERCC3-203ENST00000445889 POM121Q96HA1 1249 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 SMIM7Q9BQ49 75 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 SLC25A22Q9H936 323 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 CISD1Q9NZ45 108 aaKnown RBP12.08□□□□□ -0.48
ERCC3-203ENST00000445889 LAMP3Q9UQV4 416 aa12.08□□□□□ -0.48
ERCC3-203ENST00000445889 KIR2DS1A0A191URI9 304 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 B4DEV8 164 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 FGF5P12034 268 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 FOLR3P41439 243 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 KIR2DS4P43632 304 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 COL10A1Q03692 680 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 FOXO1Q12778 655 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 KIR2DS1Q14954 304 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 CEACAM21Q3KPI0 293 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 ADGRG7Q96K78 797 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 HIST1H2AAQ96QV6 131 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 WDR54Q9H977 334 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 SPENQ96T58 3664 aaKnown RBP12.07□□□□□ -0.48
ERCC3-203ENST00000445889 USF3Q68DE3 2245 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 SNRPCP09234 159 aaKnown RBP12.07□□□□□ -0.48
ERCC3-203ENST00000445889 EGR1P18146 543 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms