RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 GNMTQ14749 295 aa16.78■□□□□ 0.28
CDKN3-204ENST00000442975 SSX1Q16384 188 aa16.78■□□□□ 0.28
CDKN3-204ENST00000442975 C8orf31Q8N9H6 132 aa16.78■□□□□ 0.28
CDKN3-204ENST00000442975 SETD6Q8TBK2 473 aa16.78■□□□□ 0.28
CDKN3-204ENST00000442975 TM2D1Q9BX74 207 aa16.78■□□□□ 0.28
CDKN3-204ENST00000442975 OR2S2Q9NQN1 319 aa16.78■□□□□ 0.28
CDKN3-204ENST00000442975 MBNL3Q9NUK0 354 aaKnown RBP16.78■□□□□ 0.28
CDKN3-204ENST00000442975 FAM90A9PA6NNJ1 464 aa16.77■□□□□ 0.28
CDKN3-204ENST00000442975 AMY1AP04745 511 aa16.77■□□□□ 0.28
CDKN3-204ENST00000442975 AMY2AP04746 511 aa16.77■□□□□ 0.28
CDKN3-204ENST00000442975 DEFA6Q01524 100 aa16.77■□□□□ 0.28
CDKN3-204ENST00000442975 C5orf24Q7Z6I8 188 aa16.77■□□□□ 0.28
CDKN3-204ENST00000442975 THNSL2Q86YJ6 484 aa16.77■□□□□ 0.28
CDKN3-204ENST00000442975 RTN4IP1Q8WWV3 396 aaPredicted RBP16.77■□□□□ 0.28
CDKN3-204ENST00000442975 URM1Q9BTM9 101 aaKnown RBP16.77■□□□□ 0.28
CDKN3-204ENST00000442975 A0A0A6YYD4 124 aa16.76■□□□□ 0.27
CDKN3-204ENST00000442975 A0A1W2PRX2 142 aa16.76■□□□□ 0.27
CDKN3-204ENST00000442975 PPP1CCP36873 323 aaKnown RBP16.76■□□□□ 0.27
CDKN3-204ENST00000442975 Q3ZCU0 254 aa16.76■□□□□ 0.27
CDKN3-204ENST00000442975 SLC25A48Q6ZT89 311 aaKnown RBP16.76■□□□□ 0.27
CDKN3-204ENST00000442975 OR2W3Q7Z3T1 314 aa16.76■□□□□ 0.27
CDKN3-204ENST00000442975 CENPVQ7Z7K6 275 aaPredicted RBP16.76■□□□□ 0.27
CDKN3-204ENST00000442975 TGIF2LXQ8IUE1 241 aa16.76■□□□□ 0.27
CDKN3-204ENST00000442975 SVOPQ8N4V2 548 aa16.76■□□□□ 0.27
CDKN3-204ENST00000442975 ZNF439Q8NDP4 499 aa16.76■□□□□ 0.27
CDKN3-204ENST00000442975 OR5AU1Q8NGC0 362 aa16.76■□□□□ 0.27
CDKN3-204ENST00000442975 OR52L2PQ8NGH6 319 aa16.76■□□□□ 0.27
CDKN3-204ENST00000442975 WIPF2Q8TF74 440 aaPredicted RBP16.76■□□□□ 0.27
CDKN3-204ENST00000442975 LPAR5Q9H1C0 372 aa16.76■□□□□ 0.27
CDKN3-204ENST00000442975 PLEKHJ1Q9NW61 149 aa16.76■□□□□ 0.27
CDKN3-204ENST00000442975 NDUFB11Q9NX14 153 aa16.76■□□□□ 0.27
CDKN3-204ENST00000442975 KCNAB3O43448 404 aa16.75■□□□□ 0.27
CDKN3-204ENST00000442975 WIPF1O43516 503 aa16.75■□□□□ 0.27
CDKN3-204ENST00000442975 MYL9P24844 172 aa16.75■□□□□ 0.27
CDKN3-204ENST00000442975 PSMB9P28065 219 aa16.75■□□□□ 0.27
CDKN3-204ENST00000442975 EMX1Q04741 257 aaPredicted RBP16.75■□□□□ 0.27
CDKN3-204ENST00000442975 CT45A1Q5HYN5 189 aa16.75■□□□□ 0.27
CDKN3-204ENST00000442975 HES5Q5TA89 166 aa16.75■□□□□ 0.27
CDKN3-204ENST00000442975 NDUFA11Q86Y39 141 aa16.75■□□□□ 0.27
CDKN3-204ENST00000442975 C1QL4Q86Z23 238 aa16.75■□□□□ 0.27
CDKN3-204ENST00000442975 IZUMO1Q8IYV9 350 aa16.75■□□□□ 0.27
CDKN3-204ENST00000442975 OR51D1Q8NGF3 324 aa16.75■□□□□ 0.27
CDKN3-204ENST00000442975 CT45A3Q8NHU0 189 aa16.75■□□□□ 0.27
CDKN3-204ENST00000442975 IL1F10Q8WWZ1 152 aa16.75■□□□□ 0.27
CDKN3-204ENST00000442975 ABHD14AQ9BUJ0 271 aa16.75■□□□□ 0.27
CDKN3-204ENST00000442975 ABRACLQ9P1F3 81 aa16.75■□□□□ 0.27
CDKN3-204ENST00000442975 JPT1Q9UK76 154 aa16.75■□□□□ 0.27
CDKN3-204ENST00000442975 V9GY05 133 aa16.75■□□□□ 0.27
CDKN3-204ENST00000442975 TET2Q6N021 2002 aaPredicted RBP16.75■□□□□ 0.27
CDKN3-204ENST00000442975 SOCS1O15524 211 aa16.74■□□□□ 0.27
CDKN3-204ENST00000442975 CD37P11049 281 aa16.74■□□□□ 0.27
CDKN3-204ENST00000442975 ZNF134P52741 427 aa16.74■□□□□ 0.27
CDKN3-204ENST00000442975 KHDC1LQ5JSQ8 128 aa16.74■□□□□ 0.27
CDKN3-204ENST00000442975 ZNF554Q86TJ5 538 aa16.74■□□□□ 0.27
CDKN3-204ENST00000442975 C5orf56Q8N8D9 126 aa16.74■□□□□ 0.27
CDKN3-204ENST00000442975 ST6GALNAC6Q969X2 333 aa16.74■□□□□ 0.27
CDKN3-204ENST00000442975 FAM3DQ96BQ1 224 aa16.74■□□□□ 0.27
CDKN3-204ENST00000442975 R3HDM4Q96D70 268 aa16.74■□□□□ 0.27
CDKN3-204ENST00000442975 NOTCH1P46531 2555 aa16.74■□□□□ 0.27
CDKN3-204ENST00000442975 NCBP2LA6PVI3 153 aaKnown RBP16.73■□□□□ 0.27
CDKN3-204ENST00000442975 TXNL1O43396 289 aa16.73■□□□□ 0.27
CDKN3-204ENST00000442975 OR10A3P58181 314 aa16.73■□□□□ 0.27
CDKN3-204ENST00000442975 HMGN3Q15651 99 aa16.73■□□□□ 0.27
CDKN3-204ENST00000442975 MOB1BQ7L9L4 216 aa16.73■□□□□ 0.27
CDKN3-204ENST00000442975 OR4X2Q8NGF9 303 aa16.73■□□□□ 0.27
CDKN3-204ENST00000442975 GALMQ96C23 342 aa16.73■□□□□ 0.27
CDKN3-204ENST00000442975 EAF1Q96JC9 268 aaPredicted RBP16.73■□□□□ 0.27
CDKN3-204ENST00000442975 HDHD3Q9BSH5 251 aaPredicted RBP16.73■□□□□ 0.27
CDKN3-204ENST00000442975 AK3Q9UIJ7 227 aa16.73■□□□□ 0.27
CDKN3-204ENST00000442975 ZNF736B4DX44 427 aaPredicted RBP16.72■□□□□ 0.27
CDKN3-204ENST00000442975 PDCD5O14737 125 aa16.72■□□□□ 0.27
CDKN3-204ENST00000442975 FGF16O43320 207 aa16.72■□□□□ 0.27
CDKN3-204ENST00000442975 MRPS14O60783 128 aaKnown RBP16.72■□□□□ 0.27
CDKN3-204ENST00000442975 RGS11O94810 467 aa16.72■□□□□ 0.27
CDKN3-204ENST00000442975 OPN1MWP04001 364 aa16.72■□□□□ 0.27
CDKN3-204ENST00000442975 OPN1MW2P0DN77 364 aa16.72■□□□□ 0.27
CDKN3-204ENST00000442975 OPN1MW3P0DN78 364 aa16.72■□□□□ 0.27
CDKN3-204ENST00000442975 VEGFCP49767 419 aa16.72■□□□□ 0.27
CDKN3-204ENST00000442975 PSMD7P51665 324 aa16.72■□□□□ 0.27
CDKN3-204ENST00000442975 ZNF137PP52743 207 aa16.72■□□□□ 0.27
CDKN3-204ENST00000442975 MORN2Q502X0 79 aa16.72■□□□□ 0.27
CDKN3-204ENST00000442975 C10orf99Q6UWK7 81 aa16.72■□□□□ 0.27
CDKN3-204ENST00000442975 OR2AK2Q8NG84 335 aa16.72■□□□□ 0.27
CDKN3-204ENST00000442975 OR2T10Q8NGZ9 312 aa16.72■□□□□ 0.27
CDKN3-204ENST00000442975 STEAP1Q9UHE8 339 aa16.72■□□□□ 0.27
CDKN3-204ENST00000442975 TCRBV4S1A1TA0A5B7 111 aa16.71■□□□□ 0.27
CDKN3-204ENST00000442975 ADARB2-AS1A8MUL3 147 aa16.71■□□□□ 0.27
CDKN3-204ENST00000442975 SERPINE3A8MV23 424 aa16.71■□□□□ 0.27
CDKN3-204ENST00000442975 DENRO43583 198 aaKnown RBP16.71■□□□□ 0.27
CDKN3-204ENST00000442975 NAPSAO96009 420 aa16.71■□□□□ 0.27
CDKN3-204ENST00000442975 HTD2P86397 168 aa16.71■□□□□ 0.27
CDKN3-204ENST00000442975 C22orf42Q6IC83 251 aa16.71■□□□□ 0.27
CDKN3-204ENST00000442975 Q6ZPA2 131 aa16.71■□□□□ 0.27
CDKN3-204ENST00000442975 SPARTQ8N0X7 666 aa16.71■□□□□ 0.27
CDKN3-204ENST00000442975 OR4F17Q8NGA8 305 aa16.71■□□□□ 0.27
CDKN3-204ENST00000442975 RBMXL1Q96E39 390 aaKnown RBP16.71■□□□□ 0.27
CDKN3-204ENST00000442975 ARHGAP5-AS1Q96IT6 56 aa16.71■□□□□ 0.27
CDKN3-204ENST00000442975 OR4F4Q96R69 305 aa16.71■□□□□ 0.27
CDKN3-204ENST00000442975 C12orf4Q9NQ89 552 aa16.71■□□□□ 0.27
CDKN3-204ENST00000442975 SHISA3A0PJX4 238 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms