RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 HTR1DP28221 377 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 PPP1CCP36873 323 aaKnown RBP12.95□□□□□ -0.34
USP39-205ENST00000442708 ZNF134P52741 427 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 PRRX1P54821 245 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 HLA-DRB3P79483 266 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 HTD2P86397 168 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 ARFRP1Q13795 201 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 SSX2Q16385 188 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 KRTAP24-1Q3LI83 254 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 PLA1AQ53H76 456 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 MINOS1Q5TGZ0 78 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 ZNF596Q8TC21 504 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 PIFOQ8TCI5 191 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 ACOT12Q8WYK0 555 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 MALSU1Q96EH3 234 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 MMP28Q9H239 520 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 OR2S2Q9NQN1 319 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 MINOS1-NBL1R4GNA1 71 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 A0A0A6YYH2 397 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 A6NJ64 397 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 TRDCB7Z8K6 153 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 XRCC3O43542 346 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 ELK1P19419 428 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 DIAPH2-AS1Q14236 149 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 HERPUD1Q15011 391 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 MORN2Q502X0 79 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 CT45A1Q5HYN5 189 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 CT45A3Q8NHU0 189 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 IL1F10Q8WWZ1 152 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 GALMQ96C23 342 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 MDFIQ99750 246 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 PARP12Q9H0J9 701 aaKnown RBP12.94□□□□□ -0.34
USP39-205ENST00000442708 AUNIPQ9H7T9 357 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 DIABLOQ9NR28 239 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 OR1A1Q9P1Q5 309 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 DPM3Q9P2X0 92 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 GNG12Q9UBI6 72 aa12.94□□□□□ -0.34
USP39-205ENST00000442708 POM121CA8CG34 1229 aa12.93□□□□□ -0.34
USP39-205ENST00000442708 CLDN34H7C241 214 aa12.93□□□□□ -0.34
USP39-205ENST00000442708 NOL3O60936 208 aaKnown RBP12.93□□□□□ -0.34
USP39-205ENST00000442708 GSTT2P0CG29 244 aa12.93□□□□□ -0.34
USP39-205ENST00000442708 GSTT2BP0CG30 244 aa12.93□□□□□ -0.34
USP39-205ENST00000442708 RAB13P51153 203 aa12.93□□□□□ -0.34
USP39-205ENST00000442708 ARL6IP1Q15041 203 aa12.93□□□□□ -0.34
USP39-205ENST00000442708 TPTE2P1Q5T6R2 138 aa12.93□□□□□ -0.34
USP39-205ENST00000442708 LINC00311Q8N616 119 aa12.93□□□□□ -0.34
USP39-205ENST00000442708 C8orf31Q8N9H6 132 aa12.93□□□□□ -0.34
USP39-205ENST00000442708 SSMEM1Q8WWF3 244 aa12.93□□□□□ -0.34
USP39-205ENST00000442708 TAF15Q92804 592 aaKnown RBP eCLIP12.93□□□□□ -0.34
USP39-205ENST00000442708 PHF21AQ96BD5 680 aa12.93□□□□□ -0.34
USP39-205ENST00000442708 S100A16Q96FQ6 103 aaKnown RBP12.93□□□□□ -0.34
USP39-205ENST00000442708 JMJD8Q96S16 334 aa12.93□□□□□ -0.34
USP39-205ENST00000442708 SSX3Q99909 188 aa12.93□□□□□ -0.34
USP39-205ENST00000442708 CHIAQ9BZP6 476 aa12.93□□□□□ -0.34
USP39-205ENST00000442708 MIXL1Q9H2W2 232 aa12.93□□□□□ -0.34
USP39-205ENST00000442708 RAB9BQ9NP90 201 aa12.93□□□□□ -0.34
USP39-205ENST00000442708 CCDC59Q9P031 241 aaKnown RBP12.93□□□□□ -0.34
USP39-205ENST00000442708 JPT1Q9UK76 154 aa12.93□□□□□ -0.34
USP39-205ENST00000442708 CCDC160A6NGH7 325 aa12.92□□□□□ -0.34
USP39-205ENST00000442708 H3BUX3 64 aa12.92□□□□□ -0.34
USP39-205ENST00000442708 CTDSP2O14595 271 aa12.92□□□□□ -0.34
USP39-205ENST00000442708 APOA1P02647 267 aa12.92□□□□□ -0.34
USP39-205ENST00000442708 DTYMKP23919 212 aa12.92□□□□□ -0.34
USP39-205ENST00000442708 TALDO1P37837 337 aa12.92□□□□□ -0.34
USP39-205ENST00000442708 TAS2R20P59543 309 aa12.92□□□□□ -0.34
USP39-205ENST00000442708 MRPS15P82914 257 aaKnown RBP12.92□□□□□ -0.34
USP39-205ENST00000442708 MADCAM1Q13477 382 aa12.92□□□□□ -0.34
USP39-205ENST00000442708 PNLIPRP3Q17RR3 467 aa12.92□□□□□ -0.34
USP39-205ENST00000442708 TMEM30BQ3MIR4 351 aa12.92□□□□□ -0.34
USP39-205ENST00000442708 FBLN7Q53RD9 439 aa12.92□□□□□ -0.34
USP39-205ENST00000442708 IGSF11Q5DX21 431 aa12.92□□□□□ -0.34
USP39-205ENST00000442708 SLC25A48Q6ZT89 311 aaKnown RBP12.92□□□□□ -0.34
USP39-205ENST00000442708 AP3S1Q92572 193 aa12.92□□□□□ -0.34
USP39-205ENST00000442708 GCDHQ92947 438 aaPredicted RBP12.92□□□□□ -0.34
USP39-205ENST00000442708 CMTM3Q96MX0 182 aa12.92□□□□□ -0.34
USP39-205ENST00000442708 ST6GALNAC5Q9BVH7 336 aa12.92□□□□□ -0.34
USP39-205ENST00000442708 SLIRPQ9GZT3 109 aaKnown RBP12.92□□□□□ -0.34
USP39-205ENST00000442708 MGAT4AQ9UM21 535 aa12.92□□□□□ -0.34
USP39-205ENST00000442708 VGLL3A8MV65 326 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 LEUTXA8MZ59 168 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 FABP7O15540 132 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 YPEL1O60688 119 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 HLA-DQB1P01920 261 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 RNASE1P07998 156 aaKnown RBP12.91□□□□□ -0.34
USP39-205ENST00000442708 GNG2P59768 71 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 SRSF7Q16629 238 aaKnown RBP eCLIP12.91□□□□□ -0.34
USP39-205ENST00000442708 LRRC75BQ2VPJ9 315 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 Q3ZCU0 254 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 TMEM69Q5SWH9 247 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 MZT2AQ6P582 158 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 Q6ZS49 121 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 TMEM86BQ8N661 226 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 GVQW1Q8N7I0 195 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.91□□□□□ -0.34
USP39-205ENST00000442708 ST6GALNAC6Q969X2 333 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 YPEL2Q96QA6 119 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 OCSTAMPQ9BR26 566 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 RSL24D1Q9UHA3 163 aaKnown RBP12.91□□□□□ -0.34
USP39-205ENST00000442708 SLC23A1Q9UHI7 598 aa12.91□□□□□ -0.34
USP39-205ENST00000442708 POMT1Q9Y6A1 747 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms