RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 MRGPRGQ86SM5 289 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 TBC1D26Q86UD7 250 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 BVESQ8NE79 360 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 RNF141Q8WVD5 230 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 SECTM1Q8WVN6 248 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 ARL11Q969Q4 196 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 CCDC120Q96HB5 630 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 CYYR1Q96J86 154 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 CXorf58Q96LI9 332 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 RNF126Q9BV68 326 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 MBNL3Q9NUK0 354 aaKnown RBP7.72□□□□□ -1.17
HDAC6-209ENST00000440653 OR5AC2Q9NZP5 309 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 GSKIPQ9P0R6 139 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 UBE2J1Q9Y385 318 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-209ENST00000440653 WIPI2Q9Y4P8 454 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 POMT1Q9Y6A1 747 aa7.72□□□□□ -1.17
HDAC6-209ENST00000440653 BORCS7-ASMTA0A0B4J1R7 106 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 IGHV1-18A0A0C4DH31 117 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 RAB19A4D1S5 217 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 MPTX1A8MV57 137 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 HSPB6O14558 160 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 MLNRO43193 412 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 FGF16O43320 207 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 GPR137BO60478 399 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 RHBDL1O75783 438 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 HKR1P10072 659 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 FOSL1P15407 271 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 M6PRP20645 277 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 VDAC1P21796 283 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 LMO1P25800 156 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 RPL12P30050 165 aaKnown RBP7.71□□□□□ -1.18
HDAC6-209ENST00000440653 GNRHRP30968 328 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 CEACAM8P31997 349 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-209ENST00000440653 MPV17P39210 176 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 ERVS71-1P61550 626 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 FOXF2Q12947 444 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 GNMTQ14749 295 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 TMEM268Q5VZI3 342 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 SLC35E4Q6ICL7 350 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 BRICD5Q6PL45 260 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 IL34Q6ZMJ4 242 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 ZNF818PQ6ZRF7 136 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 ZNF695Q8IW36 515 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 STPG2Q8N412 459 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 TCTEX1D1Q8N7M0 179 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 SLC35G3Q8N808 338 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 ZBTB34Q8NCN2 500 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 OR10V1Q8NGI7 309 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 PPP1R35Q8TAP8 253 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 GLYATL2Q8WU03 294 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 RDH5Q92781 318 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 MUCL1Q96DR8 90 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 SAT2Q96F10 170 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-209ENST00000440653 RRNAD1Q96FB5 475 aaKnown RBP7.71□□□□□ -1.18
HDAC6-209ENST00000440653 REG4Q9BYZ8 158 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 OPN3Q9H1Y3 402 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-209ENST00000440653 RAB9BQ9NP90 201 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 PRR13Q9NZ81 148 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 KCNIP1Q9NZI2 227 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 FAM215AQ9Y5M1 114 aa7.71□□□□□ -1.18
HDAC6-209ENST00000440653 A0A1W2PR80 420 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 OOEPA6NGQ2 149 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 MSGN1A6NI15 193 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 A6NLC8 198 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 SIRPB1O00241 398 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 CDIPTO14735 213 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 CRYZL1O95825 349 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 SCGB1D2O95969 90 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 CRYAAP02489 173 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 SCTP09683 121 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 BAXQ07812 192 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 ZNF266Q14584 549 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 PDCD1Q15116 288 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 CDSNQ15517 529 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 BEX5Q5H9J7 111 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 ZNF324BQ6AW86 544 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-209ENST00000440653 MEX3BQ6ZN04 569 aaKnown RBP7.7□□□□□ -1.18
HDAC6-209ENST00000440653 ACP7Q6ZNF0 438 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 SEM1Q6ZVN7 128 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 BATF2Q8N1L9 274 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 ZNF610Q8N9Z0 462 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 UBAC2Q8NBM4 344 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 OR4D5Q8NGN0 318 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 ZNF488Q96MN9 340 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 TP53RKQ96S44 253 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 TOLLIPQ9H0E2 274 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 TAF9BQ9HBM6 251 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 BARX1Q9HBU1 254 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-209ENST00000440653 CYTL1Q9NRR1 136 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 FAM212BQ9NTI7 297 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-209ENST00000440653 FBXL17Q9UF56 701 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 TRAPPC2LQ9UL33 140 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 LSM5Q9Y4Y9 91 aaKnown RBP7.7□□□□□ -1.18
HDAC6-209ENST00000440653 MXRA5Q9NR99 2828 aa7.7□□□□□ -1.18
HDAC6-209ENST00000440653 IGKV1-6A0A0C4DH72 117 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-209ENST00000440653 PRRG2O14669 202 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 HS3ST1O14792 307 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 HSPA12AO43301 675 aa7.69□□□□□ -1.18
HDAC6-209ENST00000440653 ATG12O94817 140 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms