RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 S100A9P06702 114 aaKnown RBP1.71□□□□□ -2.14
VPS41-207ENST00000439468 INAFM2P0DMQ5 153 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 HRES1P13985 223 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 IMPA1P29218 277 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 RANBP1P43487 201 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 XKP51811 444 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 SLC9A3R2Q15599 337 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 C18orf21Q32NC0 220 aaPredicted RBP1.71□□□□□ -2.14
VPS41-207ENST00000439468 ZNF660Q6AZW8 331 aaPredicted RBP1.71□□□□□ -2.14
VPS41-207ENST00000439468 WDR59Q6PJI9 974 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 MARCH3Q86UD3 253 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 CALHM3Q86XJ0 350 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 RBM45Q8IUH3 476 aaKnown RBP1.71□□□□□ -2.14
VPS41-207ENST00000439468 OR5H2Q8NGV7 314 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 OR8S1Q8NH09 359 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 OR2AE1Q8NHA4 323 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 CCL17Q92583 94 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 CIDECQ96AQ7 238 aaPredicted RBP1.71□□□□□ -2.14
VPS41-207ENST00000439468 TMIGD2Q96BF3 282 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 GLT1D1Q96MS3 346 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 LINC01587Q99440 93 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 THTPAQ9BU02 230 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 NXF2Q9GZY0 626 aaKnown RBP1.71□□□□□ -2.14
VPS41-207ENST00000439468 PLEKHA1Q9HB21 404 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 SDHAF3Q9NRP4 125 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 ZNF391Q9UJN7 358 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 POFUT2Q9Y2G5 429 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 ZNF780BQ9Y6R6 833 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 VWA8A3KMH1 1905 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 ITPR2Q14571 2701 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 NLRC5Q86WI3 1866 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 ABCC12Q96J65 1359 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 PDZD2O15018 2839 aa1.71□□□□□ -2.14
VPS41-207ENST00000439468 OTOGQ6ZRI0 2925 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 CREBBPQ92793 2442 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 LOC100506127A0A0U1RQW1 187 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 C4orf51C9J302 202 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 C9JQL5 133 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 H3BP45 60 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 RGS5O15539 181 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 ENTPD6O75354 484 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 TPM1P09493 284 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 P0C880 135 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 TGFBR2P37173 567 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 ETV1P50549 477 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 SLC18A1P54219 525 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 KLF3P57682 345 aaPredicted RBP1.7□□□□□ -2.14
VPS41-207ENST00000439468 ATMQ13315 3056 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 Q3ZCU0 254 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 Q499Y3 187 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 DEFB134Q4QY38 66 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 IDNKQ5T6J7 187 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 AADACL4Q5VUY2 407 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 UGT2A3Q6UWM9 527 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 GALNT10Q86SR1 603 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 CDRT4Q8N9R6 151 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 DRAXINQ8NBI3 349 aaPredicted RBP1.7□□□□□ -2.14
VPS41-207ENST00000439468 UBA3Q8TBC4 463 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 OR2V2Q96R30 315 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 ULBP1Q9BZM6 244 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 API5Q9BZZ5 524 aaKnown RBP1.7□□□□□ -2.14
VPS41-207ENST00000439468 HAUS4Q9H6D7 363 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 TRIM45Q9H8W5 580 aaPredicted RBP1.7□□□□□ -2.14
VPS41-207ENST00000439468 TMBIM4Q9HC24 238 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 IFT46Q9NQC8 304 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 INIPQ9NRY2 104 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 NLE1Q9NVX2 485 aaPredicted RBP1.7□□□□□ -2.14
VPS41-207ENST00000439468 TAC3Q9UHF0 121 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 CYB5R1Q9UHQ9 305 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 ICOSQ9Y6W8 199 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 R4GN34 69 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 A0A1W2PP64 1363 aa1.7□□□□□ -2.14
VPS41-207ENST00000439468 SIPA1L3O60292 1781 aaPredicted RBP1.7□□□□□ -2.14
VPS41-207ENST00000439468 ADGRG4Q8IZF6 3080 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 LRRK2Q5S007 2527 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 IGKV2-24A0A0C4DH68 120 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 IGLL5B9A064 214 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 E7EWF7 191 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 TCAPO15273 167 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 GYG2O15488 501 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 SHOX2O60902 331 aaPredicted RBP1.69□□□□□ -2.14
VPS41-207ENST00000439468 IGKV1D-33P01593 117 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 IGKV1-33P01594 117 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 IGHMP01871 453 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 GIMD1P0DJR0 217 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 CCL2P13500 99 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 PRPS1L1P21108 318 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 CD34P28906 385 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 S100A2P29034 98 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 MAGEA3P43357 314 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 CCL23P55773 120 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 TRDNQ13061 729 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 PDZD11Q5EBL8 140 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 UBE2NLQ5JXB2 153 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 CLEC18BQ6UXF7 455 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 Q6ZT83 130 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 TPGS1Q6ZTW0 290 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 ZFP82Q8N141 532 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 OR8G5Q8NG78 346 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 OR6K3Q8NGY3 331 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms