RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 TCN2P20062 427 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 TDGF1P3P51864 188 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 FGF8P55075 233 aaPredicted RBP7.33□□□□□ -1.24
HPS4-206ENST00000439453 ERVFC1-1P60608 527 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 PMS2P11Q13670 270 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 ADIRFQ15847 76 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 HIST3H3Q16695 136 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 IQCJQ1A5X6 159 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 PIGYQ3MUY2 71 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 Q6ZSR3 168 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 TGIF2LYQ8IUE0 185 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 ADPRHL1Q8NDY3 354 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 PLPPR1Q8TBJ4 325 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 TMEM18Q96B42 140 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 R3HDM4Q96D70 268 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 BBC3Q96PG8 261 aaPredicted RBP7.33□□□□□ -1.24
HPS4-206ENST00000439453 P2RX4Q99571 388 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 CEBPZOSA8MTT3 80 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 OR2J2O76002 312 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 HLA-HP01893 362 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 MMP7P09237 267 aaPredicted RBP7.33□□□□□ -1.24
HPS4-206ENST00000439453 GZMHP20718 246 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 GNRHRP30968 328 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 ERVS71-1P61550 626 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 EXT1Q16394 746 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 RSPO1Q2MKA7 263 aaPredicted RBP7.33□□□□□ -1.24
HPS4-206ENST00000439453 TEX38Q6PEX7 206 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 OR2V1Q8NHB1 315 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 THAP3Q8WTV1 239 aaPredicted RBP7.33□□□□□ -1.24
HPS4-206ENST00000439453 MBD3L1Q8WWY6 194 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 OXGR1Q96P68 337 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 TUBG2Q9NRH3 451 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 EXPH5Q8NEV8 1989 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 IGKV1-27A0A075B6S5 117 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 PPP5D1E7EU14 171 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 FBLP22087 321 aaKnown RBP7.33□□□□□ -1.24
HPS4-206ENST00000439453 ZNF41P51814 821 aaPredicted RBP7.33□□□□□ -1.24
HPS4-206ENST00000439453 PAX9P55771 341 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 ZNF726P1Q15940 193 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 NMSQ5H8A3 153 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 SPIN3Q5JUX0 258 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 NCR3LG1Q68D85 454 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 Q6ZPA2 131 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 GJC3Q8NFK1 279 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 POC1BQ8TC44 478 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 TMEM170AQ8WVE7 144 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 SPSB1Q96BD6 273 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 VSIRQ9H7M9 311 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 NAT8Q9UHE5 227 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 RALYQ9UKM9 306 aaKnown RBP7.33□□□□□ -1.24
HPS4-206ENST00000439453 IGHV3-20A0A0C4DH32 117 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 CLEC18AA5D8T8 446 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 MSR1P21757 451 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 CCKARP32238 428 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 CLEC18CQ8NCF0 446 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 TMEM37Q8WXS4 190 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 THOC3Q96J01 351 aaKnown RBP7.33□□□□□ -1.24
HPS4-206ENST00000439453 MRGPRX4Q96LA9 322 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 RSG1Q9BU20 258 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 TNFSF12O43508 249 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 GALR1P47211 349 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 MRPS34P82930 218 aaKnown RBP7.32□□□□□ -1.24
HPS4-206ENST00000439453 ZNF705AQ6ZN79 300 aaPredicted RBP7.32□□□□□ -1.24
HPS4-206ENST00000439453 SSX7Q7RTT5 188 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 PPP1R32Q7Z5V6 425 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 OR51G1Q8NGK1 321 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 OR5B12Q96R08 314 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 GPHA2Q96T91 129 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 SMIM7Q9BQ49 75 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 WDR54Q9H977 334 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 Q9N2K0 584 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 MYOTQ9UBF9 498 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 PRSS50Q9UI38 385 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 ZFYVE26Q68DK2 2539 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 M0R135 149 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 SCGB1D1O95968 90 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 VDAC1P21796 283 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 NPBWR2P48146 333 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 ENDOGQ14249 297 aaKnown RBP7.32□□□□□ -1.24
HPS4-206ENST00000439453 PDCD1Q15116 288 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 OR8B8Q15620 311 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 TMEM241Q24JQ0 296 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 PLPPR5Q32ZL2 321 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 SNAI3Q3KNW1 292 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 MRGPRGQ86SM5 289 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 OSR2Q8N2R0 312 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 OR5T1Q8NG75 326 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 ZNF799Q96GE5 643 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 PCGF1Q9BSM1 259 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 PLSCR2Q9NRY7 297 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 SLC7A10Q9NS82 523 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 RNF115Q9Y4L5 304 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 KIAA2026Q5HYC2 2103 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 DUXBA0A1W2PPF3 345 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 H7BYZ3 331 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 METTL15P1P0C7V9 234 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 UCNP55089 124 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 CLDN17P56750 224 aa7.32□□□□□ -1.24
HPS4-206ENST00000439453 FAM3BP58499 235 aaPredicted RBP7.32□□□□□ -1.24
HPS4-206ENST00000439453 TMEM267Q0VDI3 215 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms