RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 TPPPO94811 219 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 PTBP1P26599 531 aaKnown RBP eCLIP7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 PRSS3P35030 304 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 PPP5CP53041 499 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 RPL31P62899 125 aaKnown RBP7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 ARFRP1Q13795 201 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 ZNF79Q15937 498 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 ZNF260Q3ZCT1 412 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 PYHIN1Q6K0P9 492 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 HCP5Q6MZN7 132 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 OR8H2Q8N162 312 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 CD177Q8N6Q3 437 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 GDPD1Q8N9F7 314 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 SUMF2Q8NBJ7 301 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 OR2T6Q8NHC8 308 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 PPP1R35Q8TAP8 253 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 NEK7Q8TDX7 302 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 C15orf40Q8WUR7 153 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 SDSLQ96GA7 329 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 SULT4A1Q9BR01 284 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 SRRQ9GZT4 340 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 IFT22Q9H7X7 185 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 SPACA1Q9HBV2 294 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 RAB18Q9NP72 206 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 ELF5Q9UKW6 265 aaPredicted RBP7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 HSF4Q9ULV5 492 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 KCNK7Q9Y2U2 307 aa7.46□□□□□ -1.22
AC011228.1-201ENST00000439027 hCG_1809904A0A1W2PP81 198 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 A0A1W2PPE2 198 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 A0A1W2PR64 198 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 A0A1W2PRV1 198 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 SERPINE3A8MV23 424 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 SLC33A1O00400 549 aaPredicted RBP7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 MFNGO00587 321 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 GSTP1P09211 210 aaKnown RBP7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 VSIG10L2P0DP72 767 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 CD40LGP29965 261 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 KIR2DS4P43632 304 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 GNG2P59768 71 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 DGCR2P98153 550 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 COL10A1Q03692 680 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 ARL6IP1Q15041 203 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 PLA1AQ53H76 456 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 PAN3Q58A45 887 aaKnown RBP7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 HACD4Q5VWC8 232 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 TMEM200BQ69YZ2 307 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 ZNF782Q6ZMW2 699 aaPredicted RBP7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 Q8N402 240 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 KLHDC1Q8N7A1 406 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 ASCC1Q8N9N2 400 aaKnown RBP7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 OR52I2Q8NH67 350 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 NUDCD2Q8WVJ2 157 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 FCAMRQ8WWV6 532 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 AJUBAQ96IF1 538 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 SDHCQ99643 169 aaPredicted RBP7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 DPCDQ9BVM2 203 aaPredicted RBP7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 MEGF9Q9H1U4 602 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 SEBOXQ9HB31 216 aaPredicted RBP7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 TPSG1Q9NRR2 321 aa7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 RCC2Q9P258 522 aaKnown RBP7.45□□□□□ -1.22
AC011228.1-201ENST00000439027 TMEM82A0PJX8 343 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 MEIS3P1A6NDR6 274 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 GABARAPH6UMI1 98 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 CTDSPLO15194 276 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 SSX5O60225 188 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 PSPNO60542 156 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 GLAP06280 429 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 CD3GP09693 182 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 CCL3L1P16619 93 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 LMO1P25800 156 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 ERVFRD-1P60508 538 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 MRPS10P82664 201 aaKnown RBP7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 MRPS15P82914 257 aaKnown RBP7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 RBM39Q14498 530 aaKnown RBP7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 BAK1Q16611 211 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 AANATQ16613 207 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 PNLIPRP3Q17RR3 467 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 C11orf88Q6PI97 169 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 TRAPPC6BQ86SZ2 158 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 LYG1Q8N1E2 194 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 ZNF561Q8N587 486 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 SMIM4Q8WVI0 70 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 CMSS1Q9BQ75 279 aaKnown RBP7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 HDHD3Q9BSH5 251 aaPredicted RBP7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 THAP7Q9BT49 309 aaPredicted RBP7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 NPFFR1Q9GZQ6 430 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 CHST6Q9GZX3 395 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 ABCB10Q9NRK6 738 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 ING3Q9NXR8 418 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 ETAA1Q9NY74 926 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 AK3Q9UIJ7 227 aa7.44□□□□□ -1.22
AC011228.1-201ENST00000439027 PLXNB1O43157 2135 aa7.43□□□□□ -1.22
AC011228.1-201ENST00000439027 MEX3AA1L020 520 aaKnown RBP7.43□□□□□ -1.22
AC011228.1-201ENST00000439027 G3V4G9 280 aa7.43□□□□□ -1.22
AC011228.1-201ENST00000439027 SULT1C2O00338 296 aa7.43□□□□□ -1.22
AC011228.1-201ENST00000439027 GSTZ1O43708 216 aaPredicted RBP7.43□□□□□ -1.22
AC011228.1-201ENST00000439027 LANCL1O43813 399 aa7.43□□□□□ -1.22
AC011228.1-201ENST00000439027 CHST1O43916 411 aa7.43□□□□□ -1.22
AC011228.1-201ENST00000439027 ZNF737O75373 536 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms