RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 GPR157Q5UAW9 335 aa21.56■■□□□ 1.04
CPNE1-216ENST00000437340 MRPL37Q9BZE1 423 aaKnown RBP21.56■■□□□ 1.04
CPNE1-216ENST00000437340 C12orf77C9JDV5 145 aa21.55■■□□□ 1.04
CPNE1-216ENST00000437340 TNFSF12O43508 249 aa21.55■■□□□ 1.04
CPNE1-216ENST00000437340 SFTPCP11686 197 aa21.55■■□□□ 1.04
CPNE1-216ENST00000437340 GABRA2P47869 451 aa21.55■■□□□ 1.04
CPNE1-216ENST00000437340 HOXA4Q00056 320 aaPredicted RBP21.55■■□□□ 1.04
CPNE1-216ENST00000437340 TRAT1Q6PIZ9 186 aa21.55■■□□□ 1.04
CPNE1-216ENST00000437340 EIF4E3Q8N5X7 224 aaKnown RBP21.55■■□□□ 1.04
CPNE1-216ENST00000437340 CD177Q8N6Q3 437 aa21.55■■□□□ 1.04
CPNE1-216ENST00000437340 LURAP1Q96LR2 239 aa21.55■■□□□ 1.04
CPNE1-216ENST00000437340 SESN1Q9Y6P5 492 aa21.55■■□□□ 1.04
CPNE1-216ENST00000437340 GAPDHP04406 335 aaKnown RBP21.54■■□□□ 1.04
CPNE1-216ENST00000437340 PSG2P11465 335 aa21.54■■□□□ 1.04
CPNE1-216ENST00000437340 EGR1P18146 543 aa21.54■■□□□ 1.04
CPNE1-216ENST00000437340 KRBOX4Q5JUW0 171 aa21.54■■□□□ 1.04
CPNE1-216ENST00000437340 HSD17B13Q7Z5P4 300 aaPredicted RBP21.54■■□□□ 1.04
CPNE1-216ENST00000437340 GCSAMQ8N6F7 178 aa21.54■■□□□ 1.04
CPNE1-216ENST00000437340 GPHA2Q96T91 129 aa21.54■■□□□ 1.04
CPNE1-216ENST00000437340 RBM7Q9Y580 266 aaKnown RBP21.54■■□□□ 1.04
CPNE1-216ENST00000437340 CADP27708 2225 aa21.54■■□□□ 1.04
CPNE1-216ENST00000437340 ZNF737O75373 536 aa21.53■■□□□ 1.04
CPNE1-216ENST00000437340 LHBP01229 141 aa21.53■■□□□ 1.04
CPNE1-216ENST00000437340 IL2RGP31785 369 aa21.53■■□□□ 1.04
CPNE1-216ENST00000437340 GNMTQ14749 295 aa21.53■■□□□ 1.04
CPNE1-216ENST00000437340 THOC7Q6I9Y2 204 aaKnown RBP21.53■■□□□ 1.04
CPNE1-216ENST00000437340 ZBTB34Q8NCN2 500 aa21.53■■□□□ 1.04
CPNE1-216ENST00000437340 GALNT11Q8NCW6 608 aa21.53■■□□□ 1.04
CPNE1-216ENST00000437340 OR1L1Q8NH94 360 aa21.53■■□□□ 1.04
CPNE1-216ENST00000437340 BARX1Q9HBU1 254 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-216ENST00000437340 SH3BGRL2Q9UJC5 107 aa21.53■■□□□ 1.04
CPNE1-216ENST00000437340 METRNQ9UJH8 293 aa21.53■■□□□ 1.04
CPNE1-216ENST00000437340 SPRY3O43610 288 aa21.53■■□□□ 1.04
CPNE1-216ENST00000437340 GPR137BO60478 399 aa21.53■■□□□ 1.04
CPNE1-216ENST00000437340 PPP1R35Q8TAP8 253 aa21.53■■□□□ 1.04
CPNE1-216ENST00000437340 IL19Q9UHD0 177 aa21.53■■□□□ 1.04
CPNE1-216ENST00000437340 ZDHHC8Q9ULC8 765 aa21.53■■□□□ 1.04
CPNE1-216ENST00000437340 FGF16O43320 207 aa21.52■■□□□ 1.04
CPNE1-216ENST00000437340 ADAM20O43506 726 aa21.52■■□□□ 1.04
CPNE1-216ENST00000437340 HBZP02008 142 aa21.52■■□□□ 1.04
CPNE1-216ENST00000437340 SERPINE2P07093 398 aa21.52■■□□□ 1.04
CPNE1-216ENST00000437340 NKX2-1P43699 371 aaPredicted RBP21.52■■□□□ 1.04
CPNE1-216ENST00000437340 EIF5AL1Q6IS14 154 aaKnown RBP21.52■■□□□ 1.04
CPNE1-216ENST00000437340 MOGAT3Q86VF5 341 aa21.52■■□□□ 1.04
CPNE1-216ENST00000437340 DMBX1Q8NFW5 382 aa21.52■■□□□ 1.04
CPNE1-216ENST00000437340 UBALD1Q8TB05 177 aa21.52■■□□□ 1.04
CPNE1-216ENST00000437340 SNX22Q96L94 193 aa21.52■■□□□ 1.04
CPNE1-216ENST00000437340 VKORC1Q9BQB6 163 aa21.52■■□□□ 1.04
CPNE1-216ENST00000437340 FBXL17Q9UF56 701 aa21.52■■□□□ 1.04
CPNE1-216ENST00000437340 ARID1AO14497 2285 aa21.52■■□□□ 1.04
CPNE1-216ENST00000437340 IGKV1D-17A0A075B6S4 117 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 JTBO76095 146 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 FGF2P09038 288 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 OR8U9P0C7N5 309 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 SLC25A6P12236 298 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 TMEM33P57088 247 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 MSMO1Q15800 293 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 OR8U1Q8NH10 309 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 OR51H1Q8NH63 302 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 RNF141Q8WVD5 230 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 ITLN1Q8WWA0 313 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 RND1Q92730 232 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 LIN7CQ9NUP9 197 aaKnown RBP21.51■■□□□ 1.03
CPNE1-216ENST00000437340 RCL1Q9Y2P8 373 aaKnown RBP21.51■■□□□ 1.03
CPNE1-216ENST00000437340 GLIPR1P48060 266 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 RPL7L1Q6DKI1 246 aaKnown RBP21.51■■□□□ 1.03
CPNE1-216ENST00000437340 ERGIC1Q969X5 290 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 C11orf1Q9H5F2 150 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 PLEKHF2Q9H8W4 249 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 OR2S2Q9NQN1 319 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 KCNS2Q9ULS6 477 aa21.51■■□□□ 1.03
CPNE1-216ENST00000437340 RNF212BA8MTL3 300 aa21.5■■□□□ 1.03
CPNE1-216ENST00000437340 A8MXK9 166 aa21.5■■□□□ 1.03
CPNE1-216ENST00000437340 SHOXO15266 292 aa21.5■■□□□ 1.03
CPNE1-216ENST00000437340 PVALBP20472 110 aaPredicted RBP21.5■■□□□ 1.03
CPNE1-216ENST00000437340 TNFSF4P23510 183 aa21.5■■□□□ 1.03
CPNE1-216ENST00000437340 WFDC8Q8IUA0 241 aa21.5■■□□□ 1.03
CPNE1-216ENST00000437340 CCDC28AQ8IWP9 274 aa21.5■■□□□ 1.03
CPNE1-216ENST00000437340 MRGPRDQ8TDS7 321 aa21.5■■□□□ 1.03
CPNE1-216ENST00000437340 NINJ1Q92982 152 aa21.5■■□□□ 1.03
CPNE1-216ENST00000437340 PARP12Q9H0J9 701 aaKnown RBP21.5■■□□□ 1.03
CPNE1-216ENST00000437340 PPP1R3CQ9UQK1 317 aa21.5■■□□□ 1.03
CPNE1-216ENST00000437340 TFF1P04155 84 aa21.49■■□□□ 1.03
CPNE1-216ENST00000437340 SPRNQ5BIV9 151 aa21.49■■□□□ 1.03
CPNE1-216ENST00000437340 ZNF645Q8N7E2 425 aa21.49■■□□□ 1.03
CPNE1-216ENST00000437340 TMED6Q8WW62 240 aa21.49■■□□□ 1.03
CPNE1-216ENST00000437340 MGST3O14880 152 aa21.48■■□□□ 1.03
CPNE1-216ENST00000437340 IGHV1-46P01743 117 aa21.48■■□□□ 1.03
CPNE1-216ENST00000437340 THBDP07204 575 aa21.48■■□□□ 1.03
CPNE1-216ENST00000437340 TNFAIP6P98066 277 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-216ENST00000437340 ID3Q02535 119 aa21.48■■□□□ 1.03
CPNE1-216ENST00000437340 DRAM1Q8N682 238 aa21.48■■□□□ 1.03
CPNE1-216ENST00000437340 OR13A1Q8NGR1 328 aa21.48■■□□□ 1.03
CPNE1-216ENST00000437340 LSM10Q969L4 123 aaKnown RBP21.48■■□□□ 1.03
CPNE1-216ENST00000437340 CHD3Q12873 2000 aaKnown RBP21.48■■□□□ 1.03
CPNE1-216ENST00000437340 A0A1B0GU03 582 aa21.48■■□□□ 1.03
CPNE1-216ENST00000437340 DPRXA6NFQ7 191 aa21.48■■□□□ 1.03
CPNE1-216ENST00000437340 MMP9P14780 707 aa21.48■■□□□ 1.03
CPNE1-216ENST00000437340 HTD2P86397 168 aa21.48■■□□□ 1.03
CPNE1-216ENST00000437340 UBAC2Q8NBM4 344 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms