RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 SLC25A45Q8N413 288 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 OPN3Q9H1Y3 402 aaPredicted RBP13.8□□□□□ -0.2
PTPN13-204ENST00000436978 CRHP06850 196 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 ZNF385AQ96PM9 386 aaKnown RBP13.8□□□□□ -0.2
PTPN13-204ENST00000436978 V9GYH0 126 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 PI4KAP42356 2102 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 MYLKQ15746 1914 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 OR4P4Q8NGL7 312 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 SNRNP40Q96DI7 357 aaKnown RBP13.8□□□□□ -0.2
PTPN13-204ENST00000436978 ST6GALNAC2Q9UJ37 374 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 MVDP53602 400 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 TMEM30BQ3MIR4 351 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 FAM210BQ96KR6 192 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 MFSD2BA6NFX1 497 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 ISG15P05161 165 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 MMP9P14780 707 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 FCARP24071 287 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 GAMTQ14353 236 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 FAM78BQ5VT40 261 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 GPX7Q96SL4 187 aaPredicted RBP13.79□□□□□ -0.2
PTPN13-204ENST00000436978 MIOXQ9UGB7 285 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 IRF3Q14653 427 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 ADAMTS17Q8TE56 1095 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 UPK3AO75631 287 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 PSG2P11465 335 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 VAMP3Q15836 100 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 STARD4Q96DR4 205 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 METTL26Q96S19 204 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 ELOVL5Q9NYP7 299 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 ISLRO14498 428 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 KLF9Q13886 244 aaPredicted RBP13.79□□□□□ -0.2
PTPN13-204ENST00000436978 GSX1Q9H4S2 264 aaPredicted RBP13.79□□□□□ -0.2
PTPN13-204ENST00000436978 HSPB8Q9UJY1 196 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 A0A0J9YW62 118 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 FAM90A10PA6NDY2 464 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 FAM90A18PA6NE21 464 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 FAM90A16PA6NEW6 464 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 HELTA6NFD8 242 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 FAM90A20PA6NIJ5 464 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 FAM90A8PA6NJQ4 464 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 FAM90A7PA6NKC0 464 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 DHRS7CA6NNS2 312 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 FAM90A22PA8MWA6 464 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 FAM90A12PA8MX19 464 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 FAM90A5PA8MXJ8 464 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 FAM90A23PA8MXZ1 464 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 FAM90A15PP0C7V4 464 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 FAM90A13PP0C7W8 464 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 FAM90A14PP0C7W9 464 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 FAM90A24PP0C7X0 464 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 PSG4Q00888 419 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 MAP1LC3CQ9BXW4 147 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 VSIG4Q9Y279 399 aa13.79□□□□□ -0.2
PTPN13-204ENST00000436978 A0A1W2PS18 150 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 MGST3O14880 152 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 COX6A1P12074 109 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 COL8A1P27658 744 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 OR1K1Q8NGR3 316 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 CCL19Q99731 98 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 H0Y980 276 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 GTF2H5Q6ZYL4 71 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 OR10G8Q8NGN5 311 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 WASHC3Q9Y3C0 194 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 TRAV8-7A0A075B6U6 113 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 RPS4XP62701 263 aaKnown RBP13.78□□□□□ -0.2
PTPN13-204ENST00000436978 LGALSLQ3ZCW2 172 aaPredicted RBP13.78□□□□□ -0.2
PTPN13-204ENST00000436978 OR10C1Q96KK4 312 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 ASXL3Q9C0F0 2248 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 GBF1Q92538 1859 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 GFRA3O60609 400 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 IGHMP01871 453 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 PRSS12P56730 875 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 MFNGO00587 321 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 SRSF10O75494 262 aaKnown RBP13.78□□□□□ -0.2
PTPN13-204ENST00000436978 COMPP49747 757 aaPredicted RBP13.78□□□□□ -0.2
PTPN13-204ENST00000436978 GZMMP51124 257 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 ZNF345Q14585 488 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 TUSC1Q2TAM9 212 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 VSIG8P0DPA2 414 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 LINC00052Q96N35 136 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 DSPPQ9NZW4 1301 aa13.78□□□□□ -0.2
PTPN13-204ENST00000436978 TOMM20LQ6UXN7 152 aa13.77□□□□□ -0.2
PTPN13-204ENST00000436978 SCARF2Q96GP6 870 aaPredicted RBP13.77□□□□□ -0.2
PTPN13-204ENST00000436978 FOXD3Q9UJU5 478 aaPredicted RBP13.77□□□□□ -0.2
PTPN13-204ENST00000436978 FABP4P15090 132 aa13.77□□□□□ -0.2
PTPN13-204ENST00000436978 GFRA1P56159 465 aa13.77□□□□□ -0.2
PTPN13-204ENST00000436978 SAXO1Q8IYX7 474 aa13.77□□□□□ -0.2
PTPN13-204ENST00000436978 ADAD2Q8NCV1 583 aaKnown RBP13.77□□□□□ -0.2
PTPN13-204ENST00000436978 ADIPOR1Q96A54 375 aa13.77□□□□□ -0.2
PTPN13-204ENST00000436978 CLDN14O95500 239 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 RPL7P18124 248 aaKnown RBP13.77□□□□□ -0.21
PTPN13-204ENST00000436978 PMS2P11Q13670 270 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 MRGPRGQ86SM5 289 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 GBGT1Q8N5D6 347 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 RNF115Q9Y4L5 304 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 B2MP61769 119 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 SSMEM1Q8WWF3 244 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 C12orf57Q99622 126 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 MRPL37Q9BZE1 423 aaKnown RBP13.77□□□□□ -0.21
PTPN13-204ENST00000436978 CLDN18P56856 261 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms