RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 LIN54Q6MZP7 749 aa11.36□□□□□ -0.59
HDAC8-213ENST00000436675 C5orf24Q7Z6I8 188 aa11.36□□□□□ -0.59
HDAC8-213ENST00000436675 AMIGO2Q86SJ2 522 aa11.36□□□□□ -0.59
HDAC8-213ENST00000436675 PARP16Q8N5Y8 322 aa11.36□□□□□ -0.59
HDAC8-213ENST00000436675 OR4K15Q8NH41 348 aa11.36□□□□□ -0.59
HDAC8-213ENST00000436675 PDCD1LG2Q9BQ51 273 aa11.36□□□□□ -0.59
HDAC8-213ENST00000436675 MRPL20Q9BYC9 149 aaKnown RBP11.36□□□□□ -0.59
HDAC8-213ENST00000436675 TUBA4BQ9H853 241 aa11.36□□□□□ -0.59
HDAC8-213ENST00000436675 TAS2R4Q9NYW5 299 aa11.36□□□□□ -0.59
HDAC8-213ENST00000436675 TRAPPC2LQ9UL33 140 aa11.36□□□□□ -0.59
HDAC8-213ENST00000436675 STUB1Q9UNE7 303 aa11.36□□□□□ -0.59
HDAC8-213ENST00000436675 FOXA2Q9Y261 457 aaPredicted RBP11.36□□□□□ -0.59
HDAC8-213ENST00000436675 A0A1W2PP11 408 aa11.35□□□□□ -0.59
HDAC8-213ENST00000436675 J3QRE1 110 aa11.35□□□□□ -0.59
HDAC8-213ENST00000436675 SPINT2O43291 252 aa11.35□□□□□ -0.59
HDAC8-213ENST00000436675 LANCL1O43813 399 aa11.35□□□□□ -0.59
HDAC8-213ENST00000436675 IGLV1-51P01701 117 aa11.35□□□□□ -0.59
HDAC8-213ENST00000436675 HBZP02008 142 aa11.35□□□□□ -0.59
HDAC8-213ENST00000436675 SYT6Q5T7P8 510 aaPredicted RBP11.35□□□□□ -0.59
HDAC8-213ENST00000436675 ASCL4Q6XD76 172 aa11.35□□□□□ -0.59
HDAC8-213ENST00000436675 ZNF497Q6ZNH5 498 aa11.35□□□□□ -0.59
HDAC8-213ENST00000436675 LHFPL3Q86UP9 236 aa11.35□□□□□ -0.59
HDAC8-213ENST00000436675 ZDHHC13Q8IUH4 622 aa11.35□□□□□ -0.59
HDAC8-213ENST00000436675 FLYWCH2Q96CP2 140 aaKnown RBP11.35□□□□□ -0.59
HDAC8-213ENST00000436675 CPNE2Q96FN4 548 aaPredicted RBP11.35□□□□□ -0.59
HDAC8-213ENST00000436675 METTL9Q9H1A3 318 aa11.35□□□□□ -0.59
HDAC8-213ENST00000436675 ISG20L2Q9H9L3 353 aaKnown RBP11.35□□□□□ -0.59
HDAC8-213ENST00000436675 POMPQ9Y244 141 aa11.35□□□□□ -0.59
HDAC8-213ENST00000436675 ERGIC3Q9Y282 383 aa11.35□□□□□ -0.59
HDAC8-213ENST00000436675 E9PI62 339 aa11.34□□□□□ -0.59
HDAC8-213ENST00000436675 TPPP2P59282 170 aa11.34□□□□□ -0.59
HDAC8-213ENST00000436675 ADARB1P78563 741 aaKnown RBP11.34□□□□□ -0.59
HDAC8-213ENST00000436675 GNMTQ14749 295 aa11.34□□□□□ -0.59
HDAC8-213ENST00000436675 ATP6AP1Q15904 470 aa11.34□□□□□ -0.59
HDAC8-213ENST00000436675 Q3ZCU0 254 aa11.34□□□□□ -0.59
HDAC8-213ENST00000436675 C19orf54Q5BKX5 351 aa11.34□□□□□ -0.59
HDAC8-213ENST00000436675 STX19Q8N4C7 294 aa11.34□□□□□ -0.59
HDAC8-213ENST00000436675 OR5AK2Q8NH90 309 aa11.34□□□□□ -0.59
HDAC8-213ENST00000436675 NABP2Q9BQ15 211 aa11.34□□□□□ -0.59
HDAC8-213ENST00000436675 GABARAPL1Q9H0R8 117 aa11.34□□□□□ -0.59
HDAC8-213ENST00000436675 CST11Q9H112 138 aa11.34□□□□□ -0.59
HDAC8-213ENST00000436675 FBXL15Q9H469 300 aa11.34□□□□□ -0.59
HDAC8-213ENST00000436675 IFT22Q9H7X7 185 aa11.34□□□□□ -0.59
HDAC8-213ENST00000436675 AASSQ9UDR5 926 aa11.34□□□□□ -0.59
HDAC8-213ENST00000436675 ENOPH1Q9UHY7 261 aa11.34□□□□□ -0.59
HDAC8-213ENST00000436675 RPSAP08865 295 aaKnown RBP11.33□□□□□ -0.6
HDAC8-213ENST00000436675 RCC1P18754 421 aaPredicted RBP11.33□□□□□ -0.6
HDAC8-213ENST00000436675 OR3A3P47888 321 aa11.33□□□□□ -0.6
HDAC8-213ENST00000436675 ACBD7Q8N6N7 88 aa11.33□□□□□ -0.6
HDAC8-213ENST00000436675 OR52L2PQ8NGH6 319 aa11.33□□□□□ -0.6
HDAC8-213ENST00000436675 CYYR1Q96J86 154 aa11.33□□□□□ -0.6
HDAC8-213ENST00000436675 S100A13Q99584 98 aa11.33□□□□□ -0.6
HDAC8-213ENST00000436675 FAM103A1Q9BTL3 118 aaKnown RBP11.33□□□□□ -0.6
HDAC8-213ENST00000436675 ALG8Q9BVK2 526 aa11.33□□□□□ -0.6
HDAC8-213ENST00000436675 IMPAD1Q9NX62 359 aa11.33□□□□□ -0.6
HDAC8-213ENST00000436675 TMEM212A6NML5 194 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 FCN1O00602 326 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 GYG2O15488 501 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 PPP1CCP36873 323 aaKnown RBP11.32□□□□□ -0.6
HDAC8-213ENST00000436675 CX3CL1P78423 397 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 PLGLAQ15195 96 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 SLC22A6Q4U2R8 563 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 NHLRC3Q5JS37 347 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 ZNF529Q6P280 563 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 UNQ5815/PRO19632Q6UWF5 114 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 ODF3L1Q8IXM7 274 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 NPBQ8NG41 125 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 IL17DQ8TAD2 202 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 CLCC1Q96S66 551 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 ABHD14AQ9BUJ0 271 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 GABARAPL3Q9BY60 117 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 OR2S2Q9NQN1 319 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 ETAA1Q9NY74 926 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 GAB2Q9UQC2 676 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 HERC2O95714 4834 aa11.32□□□□□ -0.6
HDAC8-213ENST00000436675 ANKRD34BA5PLL1 514 aa11.31□□□□□ -0.6
HDAC8-213ENST00000436675 RBMY1BA6NDE4 496 aaKnown RBP11.31□□□□□ -0.6
HDAC8-213ENST00000436675 RBMY1EA6NEQ0 496 aaKnown RBP11.31□□□□□ -0.6
HDAC8-213ENST00000436675 MCRIP1C9JLW8 97 aa11.31□□□□□ -0.6
HDAC8-213ENST00000436675 RBMY1DP0C7P1 496 aaKnown RBP11.31□□□□□ -0.6
HDAC8-213ENST00000436675 EGR2P11161 476 aaPredicted RBP11.31□□□□□ -0.6
HDAC8-213ENST00000436675 SNRPBP14678 240 aaKnown RBP11.31□□□□□ -0.6
HDAC8-213ENST00000436675 RAB40BQ12829 278 aa11.31□□□□□ -0.6
HDAC8-213ENST00000436675 MPV17LQ2QL34 196 aa11.31□□□□□ -0.6
HDAC8-213ENST00000436675 MORN2Q502X0 79 aa11.31□□□□□ -0.6
HDAC8-213ENST00000436675 ACTBL2Q562R1 376 aa11.31□□□□□ -0.6
HDAC8-213ENST00000436675 C6orf183Q5T699 404 aa11.31□□□□□ -0.6
HDAC8-213ENST00000436675 DDI2Q5TDH0 399 aa11.31□□□□□ -0.6
HDAC8-213ENST00000436675 ZNF660Q6AZW8 331 aaPredicted RBP11.31□□□□□ -0.6
HDAC8-213ENST00000436675 LINC00596Q86U02 117 aa11.31□□□□□ -0.6
HDAC8-213ENST00000436675 PPP1R27Q86WC6 154 aa11.31□□□□□ -0.6
HDAC8-213ENST00000436675 RGP1Q92546 391 aaPredicted RBP11.31□□□□□ -0.6
HDAC8-213ENST00000436675 ORAI1Q96D31 301 aa11.31□□□□□ -0.6
HDAC8-213ENST00000436675 LGALS12Q96DT0 336 aa11.31□□□□□ -0.6
HDAC8-213ENST00000436675 RHOVQ96L33 236 aa11.31□□□□□ -0.6
HDAC8-213ENST00000436675 JAM3Q9BX67 310 aa11.31□□□□□ -0.6
HDAC8-213ENST00000436675 RAB9BQ9NP90 201 aa11.31□□□□□ -0.6
HDAC8-213ENST00000436675 IL36GQ9NZH8 169 aa11.31□□□□□ -0.6
HDAC8-213ENST00000436675 CNOT2Q9NZN8 540 aaKnown RBP11.31□□□□□ -0.6
HDAC8-213ENST00000436675 NUBP2Q9Y5Y2 271 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms