RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 UBALD1Q8TB05 177 aa5.79□□□□□ -1.48
LSM3P3-201ENST00000436601 CHPT1Q8WUD6 406 aa5.79□□□□□ -1.48
LSM3P3-201ENST00000436601 H1FXQ92522 213 aaKnown RBP5.79□□□□□ -1.48
LSM3P3-201ENST00000436601 MRGPRFQ96AM1 343 aa5.79□□□□□ -1.48
LSM3P3-201ENST00000436601 OR8B2Q96RD0 313 aa5.79□□□□□ -1.48
LSM3P3-201ENST00000436601 LINC00574Q9H8X3 128 aa5.79□□□□□ -1.48
LSM3P3-201ENST00000436601 NECAP2Q9NVZ3 263 aa5.79□□□□□ -1.48
LSM3P3-201ENST00000436601 MCUBQ9NWR8 336 aa5.79□□□□□ -1.48
LSM3P3-201ENST00000436601 EHFQ9NZC4 300 aa5.79□□□□□ -1.48
LSM3P3-201ENST00000436601 KCNIP1Q9NZI2 227 aa5.79□□□□□ -1.48
LSM3P3-201ENST00000436601 OR6C3Q9NZP0 311 aa5.79□□□□□ -1.48
LSM3P3-201ENST00000436601 MGAT4AQ9UM21 535 aa5.79□□□□□ -1.48
LSM3P3-201ENST00000436601 TENM4Q6N022 2769 aa5.79□□□□□ -1.48
LSM3P3-201ENST00000436601 TRGV10A0A0A0MS01 117 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 TRBV6-7A0A0A0MS04 114 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 IGHV4-61A0A0C4DH41 118 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 KBTBD11-OT1A0A1B0GTJ5 212 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 hADV38S2A0JD32 116 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 DISC1C4P0D8 188 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 NPIPB11E5RHQ5 1161 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 PHF1O43189 567 aaPredicted RBP5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 PTTG1O95997 202 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 HBZP02008 142 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 IFNA6P05013 189 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 HEXAP06865 529 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 VSIG10L2P0DP72 767 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 CCL3L1P16619 93 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 ZFP36P26651 326 aaKnown RBP5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 IL2RGP31785 369 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 FCGR2CP31995 323 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 FAUP35544 74 aaKnown RBP5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 GLP1RP43220 463 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 NPY4RP50391 375 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 DLX6P56179 175 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 HABP2Q14520 560 aaPredicted RBP5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 CLEC12BQ2HXU8 276 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 GAGE13Q4V321 117 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 UTF1Q5T230 341 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 AADACL3Q5VUY0 350 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 TRAT1Q6PIZ9 186 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 ZNF782Q6ZMW2 699 aaPredicted RBP5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 BTN2A1Q7KYR7 527 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 LHFPL1Q86WI0 220 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 KRTAP1-3Q8IUG1 177 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 CENPSQ8N2Z9 138 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 ARRDC1Q8N5I2 433 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 C11orf42Q8N5U0 333 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 LY6G5BQ8NDX9 201 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 DUSP18Q8NEJ0 188 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 OR52L2PQ8NGH6 319 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 OR13C8Q8NGS7 320 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 RFESDQ8TAC1 157 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 GIMAP1Q8WWP7 306 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 ARL11Q969Q4 196 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 AJUBAQ96IF1 538 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 PIMREGQ9BSJ6 248 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 CABLES2Q9BTV7 478 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 SSBP3Q9BWW4 388 aaPredicted RBP5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 MMP28Q9H239 520 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 SLC2A8Q9NY64 477 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 TAS2R3Q9NYW6 316 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 CALYQ9NYX4 217 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 OR1A1Q9P1Q5 309 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 CLN8Q9UBY8 286 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 OPN4Q9UHM6 478 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 RPUSD1Q9UJJ7 312 aaKnown RBP5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 UBE2J1Q9Y385 318 aaPredicted RBP5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 LINC00312Q9Y6C7 94 aa5.78□□□□□ -1.48
LSM3P3-201ENST00000436601 MYO18BQ8IUG5 2567 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 HEATR1Q9H583 2144 aaKnown RBP5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 A0A096LNT2 108 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 FAM240BA0A1B0GVZ2 78 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 OR5H14A6NHG9 310 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 ZNF729A6NN14 1252 aaPredicted RBP5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 BET1O15155 118 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 SPINT2O43291 252 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 MMP23AO75900 390 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 TOX4O94842 621 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 NDUFB6O95139 128 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 DIRAS3O95661 229 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 TCRBP04435 133 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 CTXN2P0C2S0 81 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 ZNF728P0DKX0 622 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 AADACP22760 399 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 NFYAP23511 347 aaPredicted RBP5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 OMGP23515 440 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 CEACAM6P40199 344 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 LOXL3P58215 753 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 TSPAN5P62079 268 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 GNB2P62879 340 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 HTD2P86397 168 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 PAX2Q02962 417 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 GNMTQ14749 295 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 LTC4SQ16873 150 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 TRIM16LQ309B1 348 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 SCGB2B2Q4G0G5 96 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 ESCO2Q56NI9 601 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 CCBE1Q6UXH8 406 aaPredicted RBP5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 IDO2Q6ZQW0 420 aa5.77□□□□□ -1.49
LSM3P3-201ENST00000436601 LDLRAD3Q86YD5 345 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms