RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 ZNF137PP52743 207 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 TAS2R43P59537 309 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 MADCAM1Q13477 382 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 RBM39Q14498 530 aaKnown RBP8.11□□□□□ -1.11
CPNE1-214ENST00000435747 INSL4Q14641 139 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 DEFB136Q30KP8 78 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 Q3ZCU0 254 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 SLC22A6Q4U2R8 563 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 GLIPR1L1Q6UWM5 242 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 OR8H3Q8N146 312 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 C5orf56Q8N8D9 126 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 OR8U1Q8NH10 309 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 NRG4Q8WWG1 115 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 TOMM40LQ969M1 308 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 MUL1Q969V5 352 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 RPEQ96AT9 228 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 MRPS24Q96EL2 167 aaKnown RBP8.11□□□□□ -1.11
CPNE1-214ENST00000435747 Q96M66 194 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 PCDHB16Q9NRJ7 776 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 PAK1IP1Q9NWT1 392 aaPredicted RBP8.11□□□□□ -1.11
CPNE1-214ENST00000435747 GFOD1Q9NXC2 390 aa8.11□□□□□ -1.11
CPNE1-214ENST00000435747 MRPS28Q9Y2Q9 187 aaKnown RBP8.11□□□□□ -1.11
CPNE1-214ENST00000435747 AMMECR1Q9Y4X0 333 aaPredicted RBP8.11□□□□□ -1.11
CPNE1-214ENST00000435747 IGHV1-3A0A0C4DH29 117 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 PNMA8CA0A1B0GUJ8 204 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 FAM90A10PA6NDY2 464 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 FAM90A7PA6NKC0 464 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 TRIM64CA6NLI5 447 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 FAM90A23PA8MXZ1 464 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 C12orf77C9JDV5 145 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 ANKRD65E5RJM6 399 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 M0QZK8 103 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 HSD17B6O14756 317 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 FGF16O43320 207 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 CSTBP04080 98 aaKnown RBP8.1□□□□□ -1.11
CPNE1-214ENST00000435747 FAM106CPP0CH98 169 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 VHLP40337 213 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 MNDAP41218 407 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 GNG10P50151 68 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 RAB7AP51149 207 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 ZNF134P52741 427 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 MED21Q13503 144 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 IRF3Q14653 427 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 LTC4SQ16873 150 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 C6orf141Q5SZD1 244 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 LRRTM1Q86UE6 522 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 IZUMO1Q8IYV9 350 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 PLSCR3Q9NRY6 295 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 MBNL3Q9NUK0 354 aaKnown RBP8.1□□□□□ -1.11
CPNE1-214ENST00000435747 CKLFQ9UBR5 152 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 MOB4Q9Y3A3 225 aa8.1□□□□□ -1.11
CPNE1-214ENST00000435747 AIPO00170 330 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 SLC31A2O15432 143 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 IGHG2P01859 326 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 MAS1P04201 325 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 CDK1P06493 297 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 GP9P14770 177 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 MGMTP16455 207 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 GPR176Q14439 515 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 ATAD3CQ5T2N8 411 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 RAB12Q6IQ22 244 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 LCNL1Q6ZST4 164 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 SLC25A48Q6ZT89 311 aaKnown RBP8.09□□□□□ -1.11
CPNE1-214ENST00000435747 JAGN1Q8N5M9 183 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 NKAIN3Q8N8D7 197 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 BPIFB6Q8NFQ5 453 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 UBALD1Q8TB05 177 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 CHPT1Q8WUD6 406 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 ARL11Q969Q4 196 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 UQCC2Q9BRT2 126 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 KRTAP4-5Q9BYR2 181 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 SPACA1Q9HBV2 294 aa8.09□□□□□ -1.11
CPNE1-214ENST00000435747 CHCHD3Q9NX63 227 aaKnown RBP8.09□□□□□ -1.11
CPNE1-214ENST00000435747 IGHV3-43A0A0B4J1X8 118 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 LINC01548A6NM66 108 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 SDCBPO00560 298 aaPredicted RBP8.08□□□□□ -1.12
CPNE1-214ENST00000435747 MYL12BO14950 172 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 CA11O75493 328 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 IGKV1D-33P01593 117 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 IGKV1-33P01594 117 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 GLAP06280 429 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 IGHV3-43DP0DP04 118 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 IGHV4-30-4P0DP06 118 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 SPNP16150 400 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 RCC1P18754 421 aaPredicted RBP8.08□□□□□ -1.12
CPNE1-214ENST00000435747 QRFPP83859 136 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 SRSF7Q16629 238 aaKnown RBP eCLIP8.08□□□□□ -1.121e-7■□□□□ 9.8
CPNE1-214ENST00000435747 CT45A1Q5HYN5 189 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 C1orf100Q5SVJ3 147 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 SYT6Q5T7P8 510 aaPredicted RBP8.08□□□□□ -1.12
CPNE1-214ENST00000435747 AWAT2Q6E213 333 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 C5orf24Q7Z6I8 188 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 STX19Q8N4C7 294 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 COMMD1Q8N668 190 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 Q8N9W7 124 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 OR4K15Q8NH41 348 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 CT45A3Q8NHU0 189 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 MRPL30Q8TCC3 161 aaKnown RBP8.08□□□□□ -1.12
CPNE1-214ENST00000435747 CCDC107Q8WV48 283 aa8.08□□□□□ -1.12
CPNE1-214ENST00000435747 RTN4IP1Q8WWV3 396 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms