RNA–Protein interactions for RNA: ENST00000435425.1

SHH-203, Transcript of sonic hedgehog, humanhuman

TSL 1 (best)

Gene SHH, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-203ENST00000435425 A6NDX4 124 aa15.01□□□□□ -0.01
SHH-203ENST00000435425 CHST1O43916 411 aa15.01□□□□□ -0.01
SHH-203ENST00000435425 NDUFA7O95182 113 aa15.01□□□□□ -0.01
SHH-203ENST00000435425 CD3GP09693 182 aa15.01□□□□□ -0.01
SHH-203ENST00000435425 MNDAP41218 407 aa15.01□□□□□ -0.01
SHH-203ENST00000435425 MRPS15P82914 257 aaKnown RBP15.01□□□□□ -0.01
SHH-203ENST00000435425 MADCAM1Q13477 382 aa15.01□□□□□ -0.01
SHH-203ENST00000435425 GNMTQ14749 295 aa15.01□□□□□ -0.01
SHH-203ENST00000435425 HMGN3Q15651 99 aa15.01□□□□□ -0.01
SHH-203ENST00000435425 PTX4Q96A99 478 aa15.01□□□□□ -0.01
SHH-203ENST00000435425 GALMQ96C23 342 aa15.01□□□□□ -0.01
SHH-203ENST00000435425 HAX1O00165 279 aa15□□□□□ -0.01
SHH-203ENST00000435425 RAB27BO00194 218 aa15□□□□□ -0.01
SHH-203ENST00000435425 PPP1CCP36873 323 aaKnown RBP15□□□□□ -0.01
SHH-203ENST00000435425 DYNLT3P51808 116 aa15□□□□□ -0.01
SHH-203ENST00000435425 TMEM30BQ3MIR4 351 aa15□□□□□ -0.01
SHH-203ENST00000435425 MORN2Q502X0 79 aa15□□□□□ -0.01
SHH-203ENST00000435425 CCDC144NLQ6NUI1 221 aa15□□□□□ -0.01
SHH-203ENST00000435425 ZNF880Q6PDB4 577 aa15□□□□□ -0.01
SHH-203ENST00000435425 ZNF554Q86TJ5 538 aa15□□□□□ -0.01
SHH-203ENST00000435425 OR13F1Q8NGS4 319 aa15□□□□□ -0.01
SHH-203ENST00000435425 OR5H6Q8NGV6 325 aa15□□□□□ -0.01
SHH-203ENST00000435425 CAPSLQ8WWF8 208 aa15□□□□□ -0.01
SHH-203ENST00000435425 MRPS26Q9BYN8 205 aaKnown RBP15□□□□□ -0.01
SHH-203ENST00000435425 RAB18Q9NP72 206 aa15□□□□□ -0.01
SHH-203ENST00000435425 C12orf4Q9NQ89 552 aa15□□□□□ -0.01
SHH-203ENST00000435425 PITPNC1Q9UKF7 332 aa15□□□□□ -0.01
SHH-203ENST00000435425 KCNK7Q9Y2U2 307 aa15□□□□□ -0.01
SHH-203ENST00000435425 OOSP1A8MZH6 123 aa14.99□□□□□ -0.01
SHH-203ENST00000435425 RPS19P39019 145 aaKnown RBP14.99□□□□□ -0.01
SHH-203ENST00000435425 REG1BP48304 166 aa14.99□□□□□ -0.01
SHH-203ENST00000435425 ZNF134P52741 427 aa14.99□□□□□ -0.01
SHH-203ENST00000435425 ARFRP1Q13795 201 aa14.99□□□□□ -0.01
SHH-203ENST00000435425 CT45A1Q5HYN5 189 aa14.99□□□□□ -0.01
SHH-203ENST00000435425 LIAT1Q6ZQX7 453 aa14.99□□□□□ -0.01
SHH-203ENST00000435425 MOB1BQ7L9L4 216 aa14.99□□□□□ -0.01
SHH-203ENST00000435425 LINC00311Q8N616 119 aa14.99□□□□□ -0.01
SHH-203ENST00000435425 ZNF439Q8NDP4 499 aa14.99□□□□□ -0.01
SHH-203ENST00000435425 CT45A3Q8NHU0 189 aa14.99□□□□□ -0.01
SHH-203ENST00000435425 LINC01006Q8NI28 216 aa14.99□□□□□ -0.01
SHH-203ENST00000435425 OCSTAMPQ9BR26 566 aa14.99□□□□□ -0.01
SHH-203ENST00000435425 Q9N2K0 584 aa14.99□□□□□ -0.01
SHH-203ENST00000435425 JPT1Q9UK76 154 aa14.99□□□□□ -0.01
SHH-203ENST00000435425 TRBV6-6A0A0A6YYG2 114 aa14.98□□□□□ -0.01
SHH-203ENST00000435425 CLPSL1A2RUU4 121 aa14.98□□□□□ -0.01
SHH-203ENST00000435425 HSD17B6O14756 317 aa14.98□□□□□ -0.01
SHH-203ENST00000435425 HIST1H1DP16402 221 aaKnown RBP14.98□□□□□ -0.01
SHH-203ENST00000435425 IL3RAP26951 378 aa14.98□□□□□ -0.01
SHH-203ENST00000435425 SERPINB10P48595 397 aa14.98□□□□□ -0.01
SHH-203ENST00000435425 VBP1P61758 197 aa14.98□□□□□ -0.01
SHH-203ENST00000435425 NCS1P62166 190 aa14.98□□□□□ -0.01
SHH-203ENST00000435425 HLA-DRB3P79483 266 aa14.98□□□□□ -0.01
SHH-203ENST00000435425 HTD2P86397 168 aa14.98□□□□□ -0.01
SHH-203ENST00000435425 MOB3BQ86TA1 216 aa14.98□□□□□ -0.01
SHH-203ENST00000435425 DRAM1Q8N682 238 aa14.98□□□□□ -0.01
SHH-203ENST00000435425 C8orf31Q8N9H6 132 aa14.98□□□□□ -0.01
SHH-203ENST00000435425 SIGLEC9Q9Y336 463 aa14.98□□□□□ -0.01
SHH-203ENST00000435425 RNF114Q9Y508 228 aa14.98□□□□□ -0.01
SHH-203ENST00000435425 A0A1B0GUS0 222 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 A0A1W2PPI3 338 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 POM121CA8CG34 1229 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 MFNGO00587 321 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 TIMM23O14925 209 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 GAPDHP04406 335 aaKnown RBP14.97□□□□□ -0.01
SHH-203ENST00000435425 SCTP09683 121 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 RAB7AP51149 207 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 Q3ZCU0 254 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 CDNFQ49AH0 187 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 FBLN7Q53RD9 439 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 SLC25A48Q6ZT89 311 aaKnown RBP14.97□□□□□ -0.01
SHH-203ENST00000435425 LYG1Q8N1E2 194 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 OR4C13Q8NGP0 309 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 OR56B4Q8NH76 319 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 MAFIPQ8WZ33 124 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 NPFFR1Q9GZQ6 430 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 NAA50Q9GZZ1 169 aaKnown RBP14.97□□□□□ -0.01
SHH-203ENST00000435425 RHBDL2Q9NX52 303 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 ELF5Q9UKW6 265 aaPredicted RBP14.97□□□□□ -0.01
SHH-203ENST00000435425 MGAT4AQ9UM21 535 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 MMP24Q9Y5R2 645 aa14.97□□□□□ -0.01
SHH-203ENST00000435425 YPEL1O60688 119 aa14.96□□□□□ -0.01
SHH-203ENST00000435425 TSPAN9O75954 239 aa14.96□□□□□ -0.01
SHH-203ENST00000435425 RGS11O94810 467 aa14.96□□□□□ -0.01
SHH-203ENST00000435425 SNRNP70P08621 437 aaKnown RBP14.96□□□□□ -0.01
SHH-203ENST00000435425 TALDO1P37837 337 aa14.96□□□□□ -0.01
SHH-203ENST00000435425 HES1Q14469 280 aa14.96□□□□□ -0.01
SHH-203ENST00000435425 GPR107Q5VW38 600 aa14.96□□□□□ -0.01
SHH-203ENST00000435425 IZUMO1Q8IYV9 350 aa14.96□□□□□ -0.01
SHH-203ENST00000435425 PHF21AQ96BD5 680 aa14.96□□□□□ -0.01
SHH-203ENST00000435425 YPEL2Q96QA6 119 aa14.96□□□□□ -0.01
SHH-203ENST00000435425 ABHD14AQ9BUJ0 271 aa14.96□□□□□ -0.01
SHH-203ENST00000435425 ZNF747Q9BV97 191 aa14.96□□□□□ -0.01
SHH-203ENST00000435425 C16orf95Q9H693 158 aa14.96□□□□□ -0.01
SHH-203ENST00000435425 SLC23A1Q9UHI7 598 aa14.96□□□□□ -0.01
SHH-203ENST00000435425 ZNF230Q9UIE0 474 aaPredicted RBP14.96□□□□□ -0.01
SHH-203ENST00000435425 ETV7Q9Y603 341 aa14.96□□□□□ -0.01
SHH-203ENST00000435425 STAB1Q9NY15 2570 aa14.96□□□□□ -0.01
SHH-203ENST00000435425 IGHV3-72A0A0B4J1Y9 119 aa14.95□□□□□ -0.02
SHH-203ENST00000435425 IGHV1-3A0A0C4DH29 117 aa14.95□□□□□ -0.02
SHH-203ENST00000435425 TRDCB7Z8K6 153 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms