RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 CCL11P51671 97 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 RPS16P62249 146 aaKnown RBP6.45□□□□□ -1.38
CPSF6-202ENST00000435070 DEFB103AP81534 67 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 ZNF726P1Q15940 193 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 Q6ZN92 141 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 C16orf47Q6ZP98 133 aaPredicted RBP6.45□□□□□ -1.38
CPSF6-202ENST00000435070 PLPPR1Q8TBJ4 325 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 OIT3Q8WWZ8 545 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 RASL10BQ96S79 203 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 SLC39A9Q9NUM3 307 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 PRSS38A1L453 326 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 CA3P07451 260 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 IL3RAP26951 378 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 ATOH7Q8N100 152 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 FLVCR1-AS1Q8TAF5 88 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 PARLQ9H300 379 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 SLC25A22Q9H936 323 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 LYRM2Q9NU23 88 aaPredicted RBP6.45□□□□□ -1.38
CPSF6-202ENST00000435070 FBLN5Q9UBX5 448 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 C3orf85A0A1B0GTC6 90 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 PGPEP1LA6NFU8 196 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 SYT13Q7L8C5 426 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 H1FOOQ8IZA3 346 aaPredicted RBP6.45□□□□□ -1.38
CPSF6-202ENST00000435070 PPP1R35Q8TAP8 253 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 GAL3ST2Q9H3Q3 398 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 ZNF552Q9H707 407 aaPredicted RBP6.45□□□□□ -1.38
CPSF6-202ENST00000435070 GPR35Q9HC97 309 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 LNP1A1A4G5 178 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 DXOO77932 396 aaKnown RBP6.45□□□□□ -1.38
CPSF6-202ENST00000435070 CDS2O95674 445 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 PMP22Q01453 160 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 CLEC2AQ6UVW9 174 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 CADM4Q8NFZ8 388 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 TECTBQ96PL2 329 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 PPP1R3CQ9UQK1 317 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 TRAF3IP2O43734 574 aaPredicted RBP6.44□□□□□ -1.38
CPSF6-202ENST00000435070 NDUFB8O95169 186 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 RPL11P62913 178 aaKnown RBP6.44□□□□□ -1.38
CPSF6-202ENST00000435070 MZT1Q08AG7 82 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 RAB31Q13636 194 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 HES1Q14469 280 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 TTC32Q5I0X7 151 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 ACTL10Q5JWF8 245 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 C9orf50Q5SZB4 431 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 FNDC7Q5VTL7 733 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 D2HGDHQ8N465 521 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 OR8G5Q8NG78 346 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 ELSPBP1Q96BH3 223 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 ZNF703Q9H7S9 590 aaPredicted RBP6.44□□□□□ -1.38
CPSF6-202ENST00000435070 MYO15AQ9UKN7 3530 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 CHD7Q9P2D1 2997 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 VEGFBP49765 207 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 MTCP1P56278 107 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 RAB9BQ9NP90 201 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 SLC17A4Q9Y2C5 497 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 SELENOKQ9Y6D0 94 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 HSPB6O14558 160 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 TIMM8AO60220 97 aaPredicted RBP6.44□□□□□ -1.38
CPSF6-202ENST00000435070 GYPAP02724 150 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.44□□□□□ -1.388e-8■■■■■ 41
CPSF6-202ENST00000435070 ODF3L1Q8IXM7 274 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 FAM89BQ8N5H3 189 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 RBMXL3Q8N7X1 1067 aaKnown RBP6.44□□□□□ -1.38
CPSF6-202ENST00000435070 BAHD1Q8TBE0 780 aaPredicted RBP6.44□□□□□ -1.38
CPSF6-202ENST00000435070 MRPL30Q8TCC3 161 aaKnown RBP6.44□□□□□ -1.38
CPSF6-202ENST00000435070 H1FXQ92522 213 aaKnown RBP6.44□□□□□ -1.38
CPSF6-202ENST00000435070 APH1AQ96BI3 265 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 NKX6-3A6NJ46 265 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 MS4A18H0YCH9 400 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 ITGB1BP1O14713 200 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 ECI1P42126 302 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 PDLIM4P50479 330 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 OR8B8Q15620 311 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 MS4A18Q3C1V0 323 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 DTX1Q86Y01 620 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 KLHDC1Q8N7A1 406 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 IL1F10Q8WWZ1 152 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 PYGO2Q9BRQ0 406 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 ZNF256Q9Y2P7 627 aaPredicted RBP6.44□□□□□ -1.38
CPSF6-202ENST00000435070 LHFPL6Q9Y693 200 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 H3BMH7 237 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 CRYAAP02489 173 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 EXT1Q16394 746 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 CYP2G1PQ6ZSU1 146 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 TGIF2LYQ8IUE0 185 aa6.44□□□□□ -1.38
CPSF6-202ENST00000435070 RYDENQ9NUL5 291 aaKnown RBP6.44□□□□□ -1.38
CPSF6-202ENST00000435070 ERRFI1Q9UJM3 462 aaPredicted RBP6.44□□□□□ -1.38
CPSF6-202ENST00000435070 C1QTNF9BB2RNN3 333 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 LILRB3O75022 631 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 MT-ATP6P00846 226 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 MEF2BQ02080 365 aaPredicted RBP6.43□□□□□ -1.38
CPSF6-202ENST00000435070 PIGYQ3MUY2 71 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 TBC1D26Q86UD7 250 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 OR1K1Q8NGR3 316 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 HDAC8Q9BY41 377 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 TRDCB7Z8K6 153 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 F2Z2F3 143 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 TUSC2O75896 110 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 FOXL2P58012 376 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 ATP6V1FQ16864 119 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms