RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 DCAF16Q9NXF7 216 aa12.66□□□□□ -0.38
SF1-209ENST00000433274 SMG1Q96Q15 3661 aaKnown RBP12.66□□□□□ -0.38
SF1-209ENST00000433274 KANTRA0A1W2PQU2 76 aa12.66□□□□□ -0.38
SF1-209ENST00000433274 MED19A0JLT2 244 aaPredicted RBP12.66□□□□□ -0.38
SF1-209ENST00000433274 E7EQL1 145 aa12.66□□□□□ -0.38
SF1-209ENST00000433274 SELLP14151 372 aa12.66□□□□□ -0.38
SF1-209ENST00000433274 SRPXP78539 464 aa12.66□□□□□ -0.38
SF1-209ENST00000433274 GNMTQ14749 295 aa12.66□□□□□ -0.38
SF1-209ENST00000433274 ALKAL2Q6UX46 152 aa12.66□□□□□ -0.38
SF1-209ENST00000433274 OR1S1Q8NH92 325 aa12.66□□□□□ -0.38
SF1-209ENST00000433274 RFESDQ8TAC1 157 aa12.66□□□□□ -0.38
SF1-209ENST00000433274 PPP1R35Q8TAP8 253 aa12.66□□□□□ -0.38
SF1-209ENST00000433274 CA5BP1Q8WTZ4 195 aa12.66□□□□□ -0.38
SF1-209ENST00000433274 ARL11Q969Q4 196 aa12.66□□□□□ -0.38
SF1-209ENST00000433274 ERGIC1Q969X5 290 aa12.66□□□□□ -0.38
SF1-209ENST00000433274 ERVH48-1M5A8F1 160 aa12.65□□□□□ -0.38
SF1-209ENST00000433274 MGST3O14880 152 aa12.65□□□□□ -0.38
SF1-209ENST00000433274 IGLV2-14P01704 120 aa12.65□□□□□ -0.38
SF1-209ENST00000433274 CD3EP07766 207 aa12.65□□□□□ -0.38
SF1-209ENST00000433274 IRF2P14316 349 aa12.65□□□□□ -0.38
SF1-209ENST00000433274 TNFRSF1AP19438 455 aa12.65□□□□□ -0.38
SF1-209ENST00000433274 SLC51BQ86UW2 128 aa12.65□□□□□ -0.38
SF1-209ENST00000433274 LILRB1Q8NHL6 650 aaPredicted RBP12.65□□□□□ -0.38
SF1-209ENST00000433274 Q8TCH9 128 aa12.65□□□□□ -0.38
SF1-209ENST00000433274 FAM222BQ8WU58 562 aa12.65□□□□□ -0.38
SF1-209ENST00000433274 TMEM56Q96MV1 263 aa12.65□□□□□ -0.38
SF1-209ENST00000433274 DIRC2Q96SL1 478 aa12.65□□□□□ -0.38
SF1-209ENST00000433274 LSM5Q9Y4Y9 91 aaKnown RBP12.65□□□□□ -0.38
SF1-209ENST00000433274 TMEM56-RWDD3S4R434 201 aa12.65□□□□□ -0.38
SF1-209ENST00000433274 H0Y980 276 aa12.65□□□□□ -0.39
SF1-209ENST00000433274 K7N7A8 449 aa12.65□□□□□ -0.39
SF1-209ENST00000433274 BCL2L11O43521 198 aa12.65□□□□□ -0.39
SF1-209ENST00000433274 LYL1P12980 280 aa12.65□□□□□ -0.39
SF1-209ENST00000433274 F2RP25116 425 aa12.65□□□□□ -0.39
SF1-209ENST00000433274 EDDM3BP56851 147 aa12.65□□□□□ -0.39
SF1-209ENST00000433274 SELENOHQ8IZQ5 122 aaKnown RBP12.65□□□□□ -0.39
SF1-209ENST00000433274 OR52M1Q8NGK5 317 aa12.65□□□□□ -0.39
SF1-209ENST00000433274 NINJ1Q92982 152 aa12.65□□□□□ -0.39
SF1-209ENST00000433274 LURAP1Q96LR2 239 aa12.65□□□□□ -0.39
SF1-209ENST00000433274 CNTNAP3BQ96NU0 1288 aa12.65□□□□□ -0.39
SF1-209ENST00000433274 CNTNAP3Q9BZ76 1288 aa12.65□□□□□ -0.39
SF1-209ENST00000433274 SEBOXQ9HB31 216 aaPredicted RBP12.65□□□□□ -0.39
SF1-209ENST00000433274 TMED3Q9Y3Q3 217 aa12.65□□□□□ -0.39
SF1-209ENST00000433274 IGHV3-43A0A0B4J1X8 118 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 A0A1B0GW55 424 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 ODAMA1E959 279 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 MSGN1A6NI15 193 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 PLAUP00749 431 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 ADH4P08319 380 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 DUX4L2P0CJ85 424 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 DUX4L3P0CJ86 424 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 DUX4L4P0CJ87 422 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 DUX4L5P0CJ88 424 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 DUX4L6P0CJ89 424 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 DUX4L7P0CJ90 424 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 IGHV3-43DP0DP04 118 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 UCP1P25874 307 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 PPP1CCP36873 323 aaKnown RBP12.64□□□□□ -0.39
SF1-209ENST00000433274 PAX5Q02548 391 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 DUX4L9Q6RFH8 374 aaPredicted RBP12.64□□□□□ -0.39
SF1-209ENST00000433274 GALNT11Q8NCW6 608 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 OR2S2Q9NQN1 319 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 DUX4Q9UBX2 424 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 RNF150Q9ULK6 438 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 PKDREJQ9NTG1 2253 aa12.64□□□□□ -0.39
SF1-209ENST00000433274 CDS2O95674 445 aa12.63□□□□□ -0.39
SF1-209ENST00000433274 GYPAP02724 150 aa12.63□□□□□ -0.39
SF1-209ENST00000433274 CD55P08174 381 aa12.63□□□□□ -0.39
SF1-209ENST00000433274 NUP62P37198 522 aaPredicted RBP12.63□□□□□ -0.39
SF1-209ENST00000433274 LTC4SQ16873 150 aa12.63□□□□□ -0.39
SF1-209ENST00000433274 STUMQ69YW2 141 aa12.63□□□□□ -0.39
SF1-209ENST00000433274 ZNF471Q9BX82 626 aaPredicted RBP12.63□□□□□ -0.39
SF1-209ENST00000433274 SAP30LQ9HAJ7 183 aa12.63□□□□□ -0.39
SF1-209ENST00000433274 DYNLRB1Q9NP97 96 aa12.63□□□□□ -0.39
SF1-209ENST00000433274 DIDO1Q9BTC0 2240 aaKnown RBP12.63□□□□□ -0.39
SF1-209ENST00000433274 SPINT2O43291 252 aa12.63□□□□□ -0.39
SF1-209ENST00000433274 MBPP02686 304 aaPredicted RBP12.63□□□□□ -0.39
SF1-209ENST00000433274 SMCO1Q147U7 214 aa12.63□□□□□ -0.39
SF1-209ENST00000433274 ZNF561Q8N587 486 aa12.63□□□□□ -0.39
SF1-209ENST00000433274 AKR1E2Q96JD6 320 aa12.63□□□□□ -0.39
SF1-209ENST00000433274 KCNJ16Q9NPI9 418 aa12.63□□□□□ -0.39
SF1-209ENST00000433274 DYSFO75923 2080 aa12.63□□□□□ -0.39
SF1-209ENST00000433274 PKD1L2Q7Z442 2459 aa12.63□□□□□ -0.39
SF1-209ENST00000433274 DEFB108AA8MXU0 73 aa12.62□□□□□ -0.39
SF1-209ENST00000433274 F5H0A9 414 aaPredicted RBP12.62□□□□□ -0.39
SF1-209ENST00000433274 C15orf65H3BRN8 121 aa12.62□□□□□ -0.39
SF1-209ENST00000433274 DEDDO75618 318 aa12.62□□□□□ -0.39
SF1-209ENST00000433274 RLN2P04090 185 aa12.62□□□□□ -0.39
SF1-209ENST00000433274 ZNF16P17020 682 aaPredicted RBP12.62□□□□□ -0.39
SF1-209ENST00000433274 P2RX3P56373 397 aa12.62□□□□□ -0.39
SF1-209ENST00000433274 TRAT1Q6PIZ9 186 aa12.62□□□□□ -0.39
SF1-209ENST00000433274 DRAM1Q8N682 238 aa12.62□□□□□ -0.39
SF1-209ENST00000433274 OR5D13Q8NGL4 314 aa12.62□□□□□ -0.39
SF1-209ENST00000433274 ST8SIA2Q92186 375 aa12.62□□□□□ -0.39
SF1-209ENST00000433274 RBPMSQ93062 196 aaKnown RBP12.62□□□□□ -0.39
SF1-209ENST00000433274 LRRC46Q96FV0 321 aa12.62□□□□□ -0.39
SF1-209ENST00000433274 CCL13Q99616 98 aa12.62□□□□□ -0.39
SF1-209ENST00000433274 EGLN1Q9GZT9 426 aa12.62□□□□□ -0.39
SF1-209ENST00000433274 OR2D2Q9H210 308 aa12.62□□□□□ -0.39
SF1-209ENST00000433274 RPS10-NUDT3A0A1W2PQS6 291 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms