RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 CRYAAP02489 173 aa10.81□□□□□ -0.68
DDX56-204ENST00000431640 SEC11BP0C7V7 166 aa10.81□□□□□ -0.68
DDX56-204ENST00000431640 CEACAM8P31997 349 aaPredicted RBP10.81□□□□□ -0.68
DDX56-204ENST00000431640 CEACAM6P40199 344 aa10.81□□□□□ -0.68
DDX56-204ENST00000431640 VAMP2P63027 116 aa10.81□□□□□ -0.68
DDX56-204ENST00000431640 ID3Q02535 119 aa10.81□□□□□ -0.68
DDX56-204ENST00000431640 SMIM21Q3B7S5 101 aa10.81□□□□□ -0.68
DDX56-204ENST00000431640 NMSQ5H8A3 153 aa10.81□□□□□ -0.68
DDX56-204ENST00000431640 WDR82Q6UXN9 313 aa10.81□□□□□ -0.68
DDX56-204ENST00000431640 ZGRF1Q86YA3 2104 aa10.81□□□□□ -0.68
DDX56-204ENST00000431640 FAM90A1Q86YD7 464 aa10.81□□□□□ -0.68
DDX56-204ENST00000431640 OR10Z1Q8NGY1 313 aa10.81□□□□□ -0.68
DDX56-204ENST00000431640 GALMQ96C23 342 aa10.81□□□□□ -0.68
DDX56-204ENST00000431640 FAM212BQ9NTI7 297 aaPredicted RBP10.81□□□□□ -0.68
DDX56-204ENST00000431640 SH3BGRL2Q9UJC5 107 aa10.81□□□□□ -0.68
DDX56-204ENST00000431640 ADAM20O43506 726 aa10.8□□□□□ -0.68
DDX56-204ENST00000431640 GLRXP35754 106 aa10.8□□□□□ -0.68
DDX56-204ENST00000431640 PJVKQ0ZLH3 352 aa10.8□□□□□ -0.68
DDX56-204ENST00000431640 TESK1Q15569 626 aa10.8□□□□□ -0.68
DDX56-204ENST00000431640 SWI5Q1ZZU3 235 aa10.8□□□□□ -0.68
DDX56-204ENST00000431640 TRAT1Q6PIZ9 186 aa10.8□□□□□ -0.68
DDX56-204ENST00000431640 ZNF474Q6S9Z5 364 aaPredicted RBP10.8□□□□□ -0.68
DDX56-204ENST00000431640 Q6ZR03 302 aa10.8□□□□□ -0.68
DDX56-204ENST00000431640 FAM219AQ8IW50 185 aa10.8□□□□□ -0.68
DDX56-204ENST00000431640 OR2C3Q8N628 320 aa10.8□□□□□ -0.68
DDX56-204ENST00000431640 ST6GALNAC3Q8NDV1 305 aa10.8□□□□□ -0.68
DDX56-204ENST00000431640 BPIFCQ8NFQ6 507 aa10.8□□□□□ -0.68
DDX56-204ENST00000431640 LSM10Q969L4 123 aaKnown RBP10.8□□□□□ -0.68
DDX56-204ENST00000431640 GINS3Q9BRX5 216 aa10.8□□□□□ -0.68
DDX56-204ENST00000431640 TOLLIPQ9H0E2 274 aa10.8□□□□□ -0.68
DDX56-204ENST00000431640 C11orf1Q9H5F2 150 aa10.8□□□□□ -0.68
DDX56-204ENST00000431640 PARP11Q9NR21 331 aa10.8□□□□□ -0.68
DDX56-204ENST00000431640 OR1A1Q9P1Q5 309 aa10.8□□□□□ -0.68
DDX56-204ENST00000431640 PTBP3O95758 552 aaKnown RBP10.79□□□□□ -0.68
DDX56-204ENST00000431640 IGHV3-13P01766 116 aa10.79□□□□□ -0.68
DDX56-204ENST00000431640 CFHR2P36980 270 aa10.79□□□□□ -0.68
DDX56-204ENST00000431640 RAB5CP51148 216 aa10.79□□□□□ -0.68
DDX56-204ENST00000431640 MSMO1Q15800 293 aa10.79□□□□□ -0.68
DDX56-204ENST00000431640 ZNF826PQ6ZT77 177 aa10.79□□□□□ -0.68
DDX56-204ENST00000431640 S100PBPQ96BU1 408 aa10.79□□□□□ -0.68
DDX56-204ENST00000431640 LURAP1Q96LR2 239 aa10.79□□□□□ -0.68
DDX56-204ENST00000431640 SMIM3Q9BZL3 60 aa10.79□□□□□ -0.68
DDX56-204ENST00000431640 MSL2Q9HCI7 577 aa10.79□□□□□ -0.68
DDX56-204ENST00000431640 LIN7CQ9NUP9 197 aaKnown RBP10.79□□□□□ -0.68
DDX56-204ENST00000431640 RALYQ9UKM9 306 aaKnown RBP10.79□□□□□ -0.68
DDX56-204ENST00000431640 TMEM218A2RU14 115 aa10.78□□□□□ -0.68
DDX56-204ENST00000431640 M0R1B8 84 aa10.78□□□□□ -0.68
DDX56-204ENST00000431640 WRBO00258 174 aa10.78□□□□□ -0.68
DDX56-204ENST00000431640 TNFSF12O43508 249 aa10.78□□□□□ -0.68
DDX56-204ENST00000431640 MED6O75586 246 aa10.78□□□□□ -0.68
DDX56-204ENST00000431640 SCO1O75880 301 aa10.78□□□□□ -0.68
DDX56-204ENST00000431640 APOC3P02656 99 aa10.78□□□□□ -0.68
DDX56-204ENST00000431640 IL2RGP31785 369 aa10.78□□□□□ -0.68
DDX56-204ENST00000431640 UQCRFS1P47985 274 aa10.78□□□□□ -0.68
DDX56-204ENST00000431640 ZNF83P51522 516 aa10.78□□□□□ -0.68
DDX56-204ENST00000431640 RPS23P62266 143 aaKnown RBP10.78□□□□□ -0.68
DDX56-204ENST00000431640 PAX5Q02548 391 aa10.78□□□□□ -0.68
DDX56-204ENST00000431640 ZNF266Q14584 549 aa10.78□□□□□ -0.68
DDX56-204ENST00000431640 PRAMEF6Q5VXH4 476 aa10.78□□□□□ -0.68
DDX56-204ENST00000431640 PRR18Q8N4B5 295 aa10.78□□□□□ -0.68
DDX56-204ENST00000431640 PPP1R35Q8TAP8 253 aa10.78□□□□□ -0.68
DDX56-204ENST00000431640 ERGIC1Q969X5 290 aa10.78□□□□□ -0.68
DDX56-204ENST00000431640 LYRM2Q9NU23 88 aaPredicted RBP10.78□□□□□ -0.68
DDX56-204ENST00000431640 COL6A6A6NMZ7 2263 aa10.78□□□□□ -0.68
DDX56-204ENST00000431640 C3orf80F5H4A9 247 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 PRRG2O14669 202 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 PSPNO60542 156 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 FBXO24O75426 580 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 F2RL1P55085 397 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 SELENOVP59797 346 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 POLR2GP62487 172 aaKnown RBP eCLIP10.77□□□□□ -0.68
DDX56-204ENST00000431640 EWSR1Q01844 656 aaKnown RBP eCLIP10.77□□□□□ -0.68
DDX56-204ENST00000431640 BAXQ07812 192 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 MST1LQ2TV78 715 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 PXDC1Q5TGL8 231 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 SSX8Q7RTT4 187 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 SPAG16Q8N0X2 631 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 COMMD1Q8N668 190 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 OR2Z1Q8NG97 314 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 NINJ1Q92982 152 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 NARS2Q96I59 477 aaKnown RBP10.77□□□□□ -0.68
DDX56-204ENST00000431640 UFSP2Q9NUQ7 469 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 DUSP13Q9UII6 198 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 ZDHHC8Q9ULC8 765 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 FZR1Q9UM11 496 aa10.77□□□□□ -0.68
DDX56-204ENST00000431640 TMA7Q9Y2S6 64 aaKnown RBP10.77□□□□□ -0.68
DDX56-204ENST00000431640 STRAPQ9Y3F4 350 aaKnown RBP10.77□□□□□ -0.68
DDX56-204ENST00000431640 TRAV39A0A0B4J263 110 aa10.77□□□□□ -0.69
DDX56-204ENST00000431640 IGHV3-64DA0A0J9YX35 117 aa10.77□□□□□ -0.69
DDX56-204ENST00000431640 A8MXE2 369 aa10.77□□□□□ -0.69
DDX56-204ENST00000431640 WNT9BO14905 357 aa10.77□□□□□ -0.69
DDX56-204ENST00000431640 PITX3O75364 302 aa10.77□□□□□ -0.69
DDX56-204ENST00000431640 ATG12O94817 140 aa10.77□□□□□ -0.69
DDX56-204ENST00000431640 IGLV2-14P01704 120 aa10.77□□□□□ -0.69
DDX56-204ENST00000431640 OR8U9P0C7N5 309 aa10.77□□□□□ -0.69
DDX56-204ENST00000431640 SPP1P10451 314 aa10.77□□□□□ -0.69
DDX56-204ENST00000431640 PSG2P11465 335 aa10.77□□□□□ -0.69
DDX56-204ENST00000431640 PRDX2P32119 198 aa10.77□□□□□ -0.69
DDX56-204ENST00000431640 CAV2P51636 162 aa10.77□□□□□ -0.69
DDX56-204ENST00000431640 KLF3P57682 345 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms