RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 HSPB6O14558 160 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 LAMTOR5O43504 91 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 NEURL1O76050 574 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 NQO2P16083 231 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 EPHA1P21709 976 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 APLNRP35414 380 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 OR2B8PP59922 312 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 ACSF3Q4G176 576 aaPredicted RBP9.62□□□□□ -0.87
USP4-205ENST00000431357 SLC25A24Q6NUK1 477 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 OR10V1Q8NGI7 309 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 DDA1Q9BW61 102 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 DLL3Q9NYJ7 618 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 TRAV24A0A0B4J272 114 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 TMEM210A6NLX4 147 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 KIAA1324LA8MWY0 1029 aaPredicted RBP9.62□□□□□ -0.87
USP4-205ENST00000431357 TNFSF12O43508 249 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 NGFP01138 241 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 LINC00614P0C842 121 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 CD200P41217 278 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 RUNX1Q01196 453 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 BEND2Q8NDZ0 799 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 SCGB1C1Q8TD33 95 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 GPHA2Q96T91 129 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 PSMG3Q9BT73 122 aaPredicted RBP9.62□□□□□ -0.87
USP4-205ENST00000431357 ERRFI1Q9UJM3 462 aaPredicted RBP9.62□□□□□ -0.87
USP4-205ENST00000431357 LAMA1P25391 3075 aa9.62□□□□□ -0.87
USP4-205ENST00000431357 LOC102723971A0A1B0GUV8 181 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 ZNF503-AS2A6NEH8 195 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 MKRN2OSH3BPM6 223 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 J3QT63 122 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 HS3ST1O14792 307 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 PPIHO43447 177 aaKnown RBP9.61□□□□□ -0.87
USP4-205ENST00000431357 F10P00742 488 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 RPS10P46783 165 aaKnown RBP9.61□□□□□ -0.87
USP4-205ENST00000431357 FOXG1P55316 489 aaPredicted RBP9.61□□□□□ -0.87
USP4-205ENST00000431357 DLK1P80370 383 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 GAGE1Q13065 139 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 C20orf204Q6ZNR8 217 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 THNSL2Q86YJ6 484 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 TGIF2LXQ8IUE1 241 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 MCEMP1Q8IX19 187 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 CYB561D1Q8N8Q1 229 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 NANOS1Q8WY41 292 aaKnown RBP9.61□□□□□ -0.87
USP4-205ENST00000431357 PRO3102Q9H379 93 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 A0A0G2JRQ6 117 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.61□□□□□ -0.87
USP4-205ENST00000431357 SYNGR2O43760 224 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 PSG2P11465 335 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 HOXA5P20719 270 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 PNRC1Q12796 327 aaPredicted RBP9.61□□□□□ -0.87
USP4-205ENST00000431357 KIAA0141Q14154 515 aaPredicted RBP9.61□□□□□ -0.87
USP4-205ENST00000431357 CDCP2Q5VXM1 449 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 Q8IYB0 196 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 MBD3L1Q8WWY6 194 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 RDH5Q92781 318 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 PARD6GQ9BYG4 376 aaPredicted RBP9.61□□□□□ -0.87
USP4-205ENST00000431357 TTTY12Q9BZ98 90 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 SPRY4Q9C004 299 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 OPN3Q9H1Y3 402 aaPredicted RBP9.61□□□□□ -0.87
USP4-205ENST00000431357 OR51I2Q9H344 312 aa9.61□□□□□ -0.87
USP4-205ENST00000431357 CISD1Q9NZ45 108 aaKnown RBP9.61□□□□□ -0.87
USP4-205ENST00000431357 EYSQ5T1H1 3165 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 A0A087X0M5 115 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 A0A1B0GX30 115 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 H0YL77 283 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 J3QW42 95 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 NXPH3O95157 252 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 CELA3AP09093 270 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 TMEM11P17152 192 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 S100A2P29034 98 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 GLIPR1P48060 266 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 HBG1P69891 147 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 HBG2P69892 147 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 SERF2P84101 59 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 ELOBQ15370 118 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 OR1C1Q15619 314 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 Q6P435 159 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 ZNF383Q8NA42 475 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 OR51H1Q8NH63 302 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 DTD1Q8TEA8 209 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 GPR87Q9BY21 358 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 PRDM13Q9H4Q3 707 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 LIN7CQ9NUP9 197 aaKnown RBP9.6□□□□□ -0.87
USP4-205ENST00000431357 GAB2Q9UQC2 676 aa9.6□□□□□ -0.87
USP4-205ENST00000431357 TGOLN2O43493 480 aa9.59□□□□□ -0.87
USP4-205ENST00000431357 MAGEA5P43359 124 aa9.59□□□□□ -0.87
USP4-205ENST00000431357 CEBPGP53567 150 aa9.59□□□□□ -0.87
USP4-205ENST00000431357 PLGLB1Q02325 96 aa9.59□□□□□ -0.87
USP4-205ENST00000431357 TMEM251Q8N6I4 163 aa9.59□□□□□ -0.87
USP4-205ENST00000431357 OR13D1Q8NGV5 346 aa9.59□□□□□ -0.87
USP4-205ENST00000431357 ZNF488Q96MN9 340 aa9.59□□□□□ -0.87
USP4-205ENST00000431357 P2RX4Q99571 388 aa9.59□□□□□ -0.87
USP4-205ENST00000431357 RTL8AQ9BWD3 113 aa9.59□□□□□ -0.87
USP4-205ENST00000431357 PSENENQ9NZ42 101 aa9.59□□□□□ -0.87
USP4-205ENST00000431357 FAM166BA8MTA8 275 aa9.59□□□□□ -0.87
USP4-205ENST00000431357 RNF212BA8MTL3 300 aa9.59□□□□□ -0.87
USP4-205ENST00000431357 ZNF727A8MUV8 499 aa9.59□□□□□ -0.87
USP4-205ENST00000431357 C21orf140B9A014 251 aa9.59□□□□□ -0.87
USP4-205ENST00000431357 FAM90A26D6RGX4 464 aa9.59□□□□□ -0.87
USP4-205ENST00000431357 JMJD7P0C870 316 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms