RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 HRH4Q9H3N8 390 aa11.72□□□□□ -0.53
HOXC4-202ENST00000430889 PLEKHF2Q9H8W4 249 aa11.72□□□□□ -0.53
HOXC4-202ENST00000430889 SEBOXQ9HB31 216 aaPredicted RBP11.72□□□□□ -0.53
HOXC4-202ENST00000430889 MSL2Q9HCI7 577 aa11.72□□□□□ -0.53
HOXC4-202ENST00000430889 FAM212BQ9NTI7 297 aaPredicted RBP11.72□□□□□ -0.53
HOXC4-202ENST00000430889 SVILO95425 2214 aa11.72□□□□□ -0.53
HOXC4-202ENST00000430889 AKAP13Q12802 2813 aa11.72□□□□□ -0.53
HOXC4-202ENST00000430889 DSPP15924 2871 aaKnown RBP11.72□□□□□ -0.53
HOXC4-202ENST00000430889 C12orf77C9JDV5 145 aa11.71□□□□□ -0.53
HOXC4-202ENST00000430889 SSSCA1O60232 199 aa11.71□□□□□ -0.53
HOXC4-202ENST00000430889 GCH1P30793 250 aa11.71□□□□□ -0.53
HOXC4-202ENST00000430889 CFHR2P36980 270 aa11.71□□□□□ -0.53
HOXC4-202ENST00000430889 F2RL1P55085 397 aa11.71□□□□□ -0.53
HOXC4-202ENST00000430889 TAGLNQ01995 201 aaKnown RBP11.71□□□□□ -0.53
HOXC4-202ENST00000430889 Q6ZRG5 221 aa11.71□□□□□ -0.53
HOXC4-202ENST00000430889 SPAG16Q8N0X2 631 aa11.71□□□□□ -0.53
HOXC4-202ENST00000430889 DRAM1Q8N682 238 aa11.71□□□□□ -0.53
HOXC4-202ENST00000430889 OR51H1Q8NH63 302 aa11.71□□□□□ -0.53
HOXC4-202ENST00000430889 TMEM171Q8WVE6 324 aa11.71□□□□□ -0.53
HOXC4-202ENST00000430889 C5orf30Q96GV9 206 aa11.71□□□□□ -0.53
HOXC4-202ENST00000430889 UQCC1Q9NVA1 299 aa11.71□□□□□ -0.53
HOXC4-202ENST00000430889 OR14J1Q9UGF5 321 aa11.71□□□□□ -0.53
HOXC4-202ENST00000430889 IGKV1-5P01602 117 aa11.71□□□□□ -0.54
HOXC4-202ENST00000430889 CRYABP02511 175 aaKnown RBP11.71□□□□□ -0.54
HOXC4-202ENST00000430889 PVALBP20472 110 aaPredicted RBP11.71□□□□□ -0.54
HOXC4-202ENST00000430889 ID4P47928 161 aa11.71□□□□□ -0.54
HOXC4-202ENST00000430889 NKX6-1P78426 367 aaPredicted RBP11.71□□□□□ -0.54
HOXC4-202ENST00000430889 MSMO1Q15800 293 aa11.71□□□□□ -0.54
HOXC4-202ENST00000430889 Q6ZRM9 215 aa11.71□□□□□ -0.54
HOXC4-202ENST00000430889 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.71□□□□□ -0.54
HOXC4-202ENST00000430889 OR1L1Q8NH94 360 aa11.71□□□□□ -0.54
HOXC4-202ENST00000430889 UBALD1Q8TB05 177 aa11.71□□□□□ -0.54
HOXC4-202ENST00000430889 NARS2Q96I59 477 aaKnown RBP11.71□□□□□ -0.54
HOXC4-202ENST00000430889 MAGT1Q9H0U3 335 aa11.71□□□□□ -0.54
HOXC4-202ENST00000430889 SH3BGRL3Q9H299 93 aa11.71□□□□□ -0.54
HOXC4-202ENST00000430889 CACFD1Q9UGQ2 172 aa11.71□□□□□ -0.54
HOXC4-202ENST00000430889 METRNQ9UJH8 293 aa11.71□□□□□ -0.54
HOXC4-202ENST00000430889 OOEPA6NGQ2 149 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 A6NLC8 198 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 K7N7A8 449 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 KLK10O43240 276 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 IGHV3-13P01766 116 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 TFF1P04155 84 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 SERPINE2P07093 398 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 CEACAM6P40199 344 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 ARHGDIBP52566 201 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 BAXQ07812 192 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 GUCA2BQ16661 112 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 SMIM21Q3B7S5 101 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 PUSL1Q8N0Z8 303 aaKnown RBP11.7□□□□□ -0.54
HOXC4-202ENST00000430889 PRR18Q8N4B5 295 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 OR10Z1Q8NGY1 313 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 FAM57AQ8TBR7 257 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 S100PBPQ96BU1 408 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 SFXN3Q9BWM7 321 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 SEC11CQ9BY50 192 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 NKX6-2Q9C056 277 aaPredicted RBP11.7□□□□□ -0.54
HOXC4-202ENST00000430889 SLC25A31Q9H0C2 315 aa11.7□□□□□ -0.54
HOXC4-202ENST00000430889 SRRM5B3KS81 715 aa11.69□□□□□ -0.54
HOXC4-202ENST00000430889 CHST1O43916 411 aa11.69□□□□□ -0.54
HOXC4-202ENST00000430889 OR8U9P0C7N5 309 aa11.69□□□□□ -0.54
HOXC4-202ENST00000430889 P0C879 139 aa11.69□□□□□ -0.54
HOXC4-202ENST00000430889 EGR1P18146 543 aa11.69□□□□□ -0.54
HOXC4-202ENST00000430889 RAB5CP51148 216 aa11.69□□□□□ -0.54
HOXC4-202ENST00000430889 DEFA5Q01523 94 aa11.69□□□□□ -0.54
HOXC4-202ENST00000430889 MZT1Q08AG7 82 aa11.69□□□□□ -0.54
HOXC4-202ENST00000430889 LRP11Q86VZ4 500 aa11.69□□□□□ -0.54
HOXC4-202ENST00000430889 CD177Q8N6Q3 437 aa11.69□□□□□ -0.54
HOXC4-202ENST00000430889 ZBTB34Q8NCN2 500 aa11.69□□□□□ -0.54
HOXC4-202ENST00000430889 OR8U1Q8NH10 309 aa11.69□□□□□ -0.54
HOXC4-202ENST00000430889 TMEM231Q9H6L2 316 aa11.69□□□□□ -0.54
HOXC4-202ENST00000430889 LIN7CQ9NUP9 197 aaKnown RBP11.69□□□□□ -0.54
HOXC4-202ENST00000430889 UFSP2Q9NUQ7 469 aa11.69□□□□□ -0.54
HOXC4-202ENST00000430889 PPP1R3CQ9UQK1 317 aa11.69□□□□□ -0.54
HOXC4-202ENST00000430889 FAM96BQ9Y3D0 163 aa11.69□□□□□ -0.54
HOXC4-202ENST00000430889 IGLV3-9A0A075B6K5 115 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 FAM74A7A6NL05 159 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 C9JQL5 133 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 RNASEK-C17orf49H0YIS7 233 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 HSPA12AO43301 675 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 ZNF737O75373 536 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 HBZP02008 142 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 ZNF83P51522 516 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 COL10A1Q03692 680 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 AESQ08117 197 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 ZNF266Q14584 549 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 FAM74A3Q4VXF1 159 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 KRTCAP3Q53RY4 240 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 SP5Q6BEB4 398 aaPredicted RBP11.68□□□□□ -0.54
HOXC4-202ENST00000430889 FAM90A1Q86YD7 464 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 SVBPQ8N300 66 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 COMMD1Q8N668 190 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 ZNF645Q8N7E2 425 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 LRRC29Q8WV35 223 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 LURAP1Q96LR2 239 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 KCNIP1Q9NZI2 227 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 STRAPQ9Y3F4 350 aaKnown RBP11.68□□□□□ -0.54
HOXC4-202ENST00000430889 C15orf65H3BRN8 121 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 GLRXP35754 106 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 SNCAP37840 140 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms